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Detailed information on CNT30369874


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381739Oryza glumipatulaManihot esculenta22.5213.7489100forward
CNT30621132Oryza glumipatulaCajanus cajan22.5217.0988100forward
CNT30578076Oryza glumipatulaOryza barthii56.7631.3495.63252forward
CNT30550306Oryza glumipatulaOryza brachyantha26.1328.6482.76116forward

Expression of CNT30369874

Peptides detected in this lncRNA

>peptide 1 (52 aa)
DRDQIIGAASTTIIKFLTQFIVVIELPTQFFNSKGLPKQTKGIITSHSSKVF*

Sequence

>CNT30369874
GGGACAGAGACCAAATAATAGGCGCTGCAAGCACCACAATAATTAAATTTCTCACGCAATTCATAGTTGTCATAGAGCTCCCAACGCAGTTCTTCAATTC
AAAAGGACTGCCCAAACAGACCAAGGGTATCATCACAAGTCATAGCAGCAAAGTTTTTTAACACGCAACATAAAAGAGAGACACTAATAATGCAATAAGA
TAACTTGAAGCGCGGATCACTAGCAAATTTCGCGCTTAGTCGACCTCCTCGATCTTGGGGCCAGCACCGCTGCCGCCAGCCGGGGGAGCATCGTCCTCGT
CCATGCCGCCGGCCATGTCCGCGCCAGCGCCCTGGTACATCTTGGCGTAGTTCTCCAGCGCGTTCTTGGACTCCACCTTCTTCTTGTGTTCCTCATCCTC
TGACTTGTACTTCTCGGCCTCCTGGACCATCTTCTCAATCTCCT