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Detailed information on CNT30618033


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39613|CYPH_CATRO, E-value = 1e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640933Sesamum indicumNymphaea colorata22.5223.8583.52182forward
CNT30518775Sesamum indicumJuglans regia32.4316.9183.59262forward
CNT30702610Sesamum indicumQuercus lobata35.2754.680.35285forward
CNT3071229Sesamum indicumQuercus suber36.2639.780.55293forward
CNT30632225Sesamum indicumVigna unguiculata17.729.4881.12143forward
CNT30201798Sesamum indicumPisum sativum8.0427.986.1565forward
CNT30710754Sesamum indicumGlycine max29.2190.7782.2236forward
CNT30167177Sesamum indicumPistacia vera45.5451.5480.43368forward
CNT3090362Sesamum indicumSolanum tuberosum17.3329.3583.57140forward
CNT30303130Sesamum indicumTriticum aestivum23.6459.3281.15191forward
CNT30568322Sesamum indicumActinidia chinensis14.7331.7385.71119forward
CNT30442485Sesamum indicumAegilops tauschii23.6422.0381.68191forward
CNT30240409Sesamum indicumAvena sativa23.6426.4284.29191forward
CNT30667711Sesamum indicumTriticum dicoccoides23.3927.8880.95189forward
CNT3075586Sesamum indicumBrassica juncea15.123.0686.89122forward
CNT30597524Sesamum indicumFraxinus excelsior9.6536.7987.1878forward
CNT30140197Sesamum indicumLolium perenne27.7228.0481.25224forward
CNT30653963Sesamum indicumRosa chinensis35.1534.1380.28284forward
CNT30686005Sesamum indicumTriticum urartu23.6454.2681.15191forward
CNT30364256Sesamum indicumSorghum bicolor14.7324.5484.03119forward
CNT30706413Sesamum indicumPrunus avium15.136.9786.89122forward
CNT3023361Sesamum indicumPopulus trichocarpa16.5820.4680.6134forward
CNT3035654Sesamum indicumCucumis melo15.144.3682.79122forward
CNT30175854Sesamum indicumVigna angularis17.742.8181.12143forward

Expression of CNT30618033

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKTQINYRRFGEICKCNFSFHPQLSSDNST*

>peptide 2 (35 aa)
MKNCDPFVFGPAFAIDRIPGPVCFLMKFSSANFEP*

>peptide 3 (86 aa)
MDSPPVPFPAVKSPPWHMNPGITRWKVEPLKWSFLPERRFGEELHHDPSGGLAANCDVEVNLRVCHCREVSLCCAFSCNCRGVYIM*

Sequence

>CNT30618033
GCCTTTTTAAAGTATTTTATAGAATTAAAAGTATAATTTTGTTAAAAGAGAATATGTTTAACTAATGAAATTATTATATTAAATCAATACCCAAAACAAT
CATATTTTTTCAATGGAAAATGAAAACACAAATTAACTATAGGAGATTTGGAGAAATTTGCAAGTGCAACTTCTCATTCCATCCACAATTAAGCTCAGAT
AATTCCACATAAGCAAACCATGCCCCACTTTATTGGGATCGCTATTATTACCACTCTTCAATCAACTCAAGCCAGCTGACCGCAGTCAGCAATCACTACG
GGCTTCGCCGTTCGCCCGGAAGACGATCCCACCTTCTCAACACCCTTCACCACGTCCATCCCCTCCACCACCTGCCCAAACACCACGTGCTTCCCGTCAA
GCCACGCCGTTTTTGCCGTGCAGATGAAGAACTGCGACCCGTTCGTGTTTGGCCCCGCGTTCGCCATCGACAGGATTCCCGGCCCCGTGTGCTTCTTGAT
GAAGTTCTCATCCGCGAATTTCGAGCCGTAGATGGATTCTCCTCCCGTCCCGTTCCCCGCCGTGAAGTCGCCCCCCTGGCACATGAACCCCGGGATCACC
CGGTGGAAAGTTGAGCCCTTGAAGTGGAGTTTCTTGCCGGAGCGTCGTTTCGGCGAAGAGCTCCATCACGATCCGTCCGGCGGGTTGGCCGCCAATTGTG
ATGTCGAAGTAAACCTTAGGGTTTGCCATTGCAGAGAGGTGAGTTTGTGCTGTGCGTTTTCTTGCAACTGTCGTGGAGTTTATATAATGTGACTGGCGGT
GTAAAAAT