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Detailed information on CNT30429993


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W171|CYP1_SOYBN, E-value = 2e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702610Papaver somniferumQuercus lobata17.4633.7281.25176forward
CNT3071229Papaver somniferumQuercus suber18.3525.0780.54185forward
CNT30710754Papaver somniferumGlycine max16.2763.0881.71164forward
CNT30167177Papaver somniferumPistacia vera15.6722.1381.65158forward
CNT3090362Papaver somniferumSolanum tuberosum19.3540.8882.56195forward
CNT30568322Papaver somniferumActinidia chinensis12.232.881.3123forward
CNT30240409Papaver somniferumAvena sativa15.8722.1380160forward
CNT30312502Papaver somniferumCamelina sativa24.469.4981.3246forward
CNT30613544Papaver somniferumArabis alpina28.9750.8782.19292forward
CNT30653963Papaver somniferumRosa chinensis18.6522.680.85188forward
CNT3023247Papaver somniferumPopulus trichocarpa22.3234.8382.22225forward

Expression of CNT30429993

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MLPIKPFSLISTNEKLRSVEFPRSNKSGRSQQQQQEPYTYHSEIQLSQ*

>peptide 2 (30 aa)
MDSPPVPFPAVKSPPWHMNSGITLWKPDPL*

Sequence

>CNT30429993
CTTCCATTTAAATCACCGCAGTAATTTGTTAACTATCAAACATTAACAGTAATAAGATACGATTCATAAAACCCCATATTTATTTTTTAAGACATGTAGT
AGCAGTACAAGATTTTTAGCTCCATTAGAGAGGTTCAGGATAGAAACAACAACAACAAAATGAAACCCAAATGACGTAATTAGGGAAATATTAATAGGGA
ACACAAGTTGATCGTTCGATCTAACACAGCTGACCGCAGTCAGCAACAACAACAGGAACCTTACACTTACCACTCTGAGATCCAACTTTCTCAATAGCTC
TAACAACATCCATACCTTCCACAACTTGACCAAAAACAACATGCTTCCCATCAAGCCATTCAGTCTTATCAGTACAAATGAAAAACTGAGATCCGTTGAA
TTTCCCCGATCTAACAAATCTGGCCGCAGTCAGCAACAACAACAGGAACCTTACACTTACCACTCTGAGATCCAACTTTCTCAATAGCTCTAACAACATC
CATACCTTCCACAACTTGACCAAAAACAACATGTTTCCCATCAAGCCATTCAGTCTTATCAGTACAAATGAAAAACTGAGATCCGTTGGTCCCAGGTCCA
GAGTTAGCCATGGATAAGATCCCAGGTCCAGTGTGTTTCTTCACGAAGTTTTCATCAGCAAACTTGGCACCGTAGATGGATTCCCCGCCGGTACCATTTC
CAGCAGTGAAATCACCTCCTTGGCACATGAACTCAGGAATCACTCTGTGGAAACCAGATCCTTTGTAGTGTAGAGGTTTTCCACATTTCCCCTTCCCTTT
TTCTCCTGTACAAAGAGCTCTGAAGTTCTCAGCGGTACGAGGAACAACATCGGCAAAAAGCTCCATTACGATGCGTCCACCGGGCTTTCCACCGACTGTC
ATGTCGAAGTAAACCTTAGGGTTGGACATTTTCTTTCGAAGTAAAGTGAAGATGGGATTGCAAAAATGCAGTGAGTAGTAGGTAGTGAGTGAATGTAGTG
AGGTTCTG