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Detailed information on CNT30568703


BLAST search results

BLAST vs Swiss-Prot:
sp|P50156|TIP11_ORYSJ, E-value = 2e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677491Actinidia chinensisSetaria viridis4.5921.9792.1176forward
CNT30549654Actinidia chinensisIpomoea triloba5.0123.0690.3683forward
CNT30513779Actinidia chinensisJuglans regia7.4227.7782.93123forward
CNT30524765Actinidia chinensisPhaseolus vulgaris11.5323.8281.15191forward
CNT30628528Actinidia chinensisVigna unguiculata15.0328.0780.72249forward
CNT30708652Actinidia chinensisGlycine max11.4761.2981.58190forward
CNT3042438Actinidia chinensisPrunus dulcis13.2226.6180.37219forward
CNT30396950Actinidia chinensisTriticum turgidum3.4424.3687.7257forward
CNT30592382Actinidia chinensisMusa acuminata10.228.480.47169forward
CNT3084637Actinidia chinensisVigna radiata15.6322.579.54259forward
CNT30662885Actinidia chinensisTriticum dicoccoides4.5332.8993.3375forward
CNT3066802Actinidia chinensisLeersia perrieri3.9227.4386.1565forward
CNT30620034Actinidia chinensisCajanus cajan12.7920.1781.6212forward
CNT30154895Actinidia chinensisPrunus persica11.9526.2381.31198forward
CNT30706772Actinidia chinensisPrunus avium13.1662.1180.73218forward
CNT3057357Actinidia chinensisAmborella trichopoda8.9923.6180.54149forward
CNT30322744Actinidia chinensisAsparagus officinalis4.120.1294.1268forward
CNT30579360Actinidia chinensisEchinochloa crusgalli11.1630.4882.7185forward
CNT30176366Actinidia chinensisVigna angularis15.6354.0780.69259forward
CNT30113763Actinidia chinensisFicus carica17.526.281.38290forward

Expression of CNT30568703

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MIISLTMPLVANRRSRHATVAPSNCAIQYKMPRRSEMWPPMNAPNVTAGLTWPPEMLAATETATKRAKACATAATTRPVGVAAPPEVSLSKAMAEP*

>peptide 2 (63 aa)
MNLLEVSTIRIGPDWYEFKDRTKNLRFKEIQSVCRPKIYGLVLKKLKNSRFESRLIHGLLISW*

>peptide 3 (36 aa)
MRVEMNSASAALSASGCVASANVPTAMRWIGIVGCP*

>peptide 4 (35 aa)
TRQNVCTHDEADCDRGYNSQTALFGIQRGCVYRVN*

>peptide 5 (34 aa)
PPAKMFAPTMKPIAIGAIIPKLPFLGSSAVAYTV*

>peptide 6 (30 aa)
MDCFDSVRFRGSRVFIDSPRIYYNKSQNKL*

Sequence

>CNT30568703
CCACCCGCCAAAATGTTTGCACCCACGATGAAGCCGATTGCGATCGGGGCTATAATTCCCAAACTGCCCTTTTTGGGATCCAGCGCGGTTGCGTATACCG
TGTAAACTAGACCGAAGGTCATCACGATCTCGAACACGAAGGCGTTCCATACGCCTACGCCGGCTGACAATGAAAATGCTGCTGTTGCCTATCAAAATAA
ATAAATAAATAAATAATATTATAAATATGAATTTACTAGAGGTGTCAACGATCCGGATTGGTCCGGATTGGTATGAATTCAAGGACCGAACCAAAAATTT
ACGGTTTAAGGAAATACAATCCGTGTGCAGACCAAAAATCTACGGTTTGGTTTTGAAAAAATTAAAAAATTCACGGTTCGAATCACGGTTAATTCACGGA
TTGTTAATTTCATGGTAGCACCATAACAAGCCGATCAAAAAAAATGATCTAACCTTTGTATGTGTAGACATAAAAATCTAGACAGAAACGAGTTTTTTAC
AAGAGGTTCTACAAGAAATTATAGAATAAAATTTTGATTTGTCTAGAGGAGATCGAACGAGAGGTTCTAGTCTGAGATCTGCATGATCCGAGAGAATCAG
AGAGAGAGAGAGAGAGAAATACCTTGGTTGATCGGAGGAGAGGTAAGTAGGTCACTAGATTGAATGAACCACAAAAAGAGGGAGGCACCACAATGTAGAT
TTAGGATTGATAAGTAACAATAATATGTTAACAATTATAATTTTAAATTTTTATCCTAAGAATTTATTTTATTTATTTATTTTAAATTTCACGGTCCGGT
TCGGTTAATTCACGGTTCGTTTATGAAAATCCATGGACTAGACCGCGAATTACGGTTTTCTAATTTTTCAATCCGTGTCCGGACCATTAATCCACGGACC
CAATAAAAAACCTATGGATTGCTTCGATTCGGTTCGGTTTCGCGGTTCGCGAGTTTTTATTGACAGCCCTAGAATTTACTATAATAAATCACAAAATAAA
TTATGATGCATTTGAGATCTCTATGGTAAGATTTAAAAAAAAAAAAAATCATTTCAAGTAAAATTATTGGGTTTTTTCTCATTTTTCTCAATTTTTTTTT
AAAATGACTAAAATAGACATGGGCTTTAATGCAACTGCCAGAGTAACTGAAATAACTAACTCTATGGGTGTAGAGTGAGACATGATAATCTCACTCACCA
TGCCATTGGTGGCGAACAGGAGGAGCAGGCACGCTACGGTGGCCCCCAGCAACTGCGCGATCCAATACAAGATGCCACGTAGGAGCGAGATGTGGCCCCC
GATGAACGCGCCGAACGTTACTGCGGGGTTGACGTGGCCGCCGGAGATGTTGGCGGCGACGGAGACCGCCACAAAGAGGGCGAAGGCGTGTGCCACCGCG
GCGACGACGAGGCCGGTTGGCGTGGCGGCGCCCCCGGAGGTGAGCTTGTCGAAGGCCATGGCGGAGCCCTGACCGGCGAAGACGAAGATGAGGGTGGAGA
TGAACTCGGCCAGCGCCGCTTTGAGCGCGTCCGGGTGCGTGGCCTCGGCGAACGTGCCCACTGCGATGCGTTGGATCGGCATAGTCGGTTGTCCGTGAGA
AATTTAGAGAGAGAAAAGGTTTGTTTCACCACTACTGCACACTCTTTTTGTTTGTGT