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Detailed information on CNT30390967


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30662885Triticum turgidumTriticum dicoccoides26.7774.56100170forward

Expression of CNT30390967

Peptides detected in this lncRNA

>peptide 1 (63 aa)
LNSSGPHWQSQTDGLIPEFKFSEARSNSTQLEITRAGRANSQFYRSKLTVSSTVLQLHELTTN*

>peptide 2 (34 aa)
MTPASAALRAPTSYTSRWLPTAILLTGIFAHLRA*

Sequence

>CNT30390967
AACTAAACAGTAGTGGACCTCACTGGCAATCTCAGACGGACGGATTAATTCCAGAATTCAAGTTTTCAGAGGCACGGTCGAACTCAACTCAACTTGAAAT
TACTCGGGCGGGACGGGCGAATTCACAGTTTTACAGAAGCAAATTGACAGTGTCGTCCACGGTTTTACAGCTCCACGAACTCACCACAAACTGATCGACC
CAGGAAGCAAACTTAAACGACTCATGGTGATGGCAAGGAAGGAGACGACGCGATCATAGATCACACGGACGGACGGGCAGGCAGGCGGCGGGCTTGCACG
CAAGCAAGCAGGCTGGCTGCGCTGAGCTCGCTGCTCAGTAGTCGGTGGTGGGGAGCTGCTCGTGGGTGCGGGAGATGAAGAGCAGCTCGTAGATGACGCC
GGCGAGCGCCGCCTTGAGGGCGCCCACCTCGTACACCTCACGGTGGCTCCCCACGGCGATCCTGCTGACCGGCATTTTCGCTCACCTCCGAGCCTAGCTC
GCTCGCTCGCTGGAGAAGAAGAAGAAGAGACTGGCTGGCCGGCCGGAGTGGAGAGAGATGAGGGAGGCGGGTTGGTGAGGAAGGAGCGGGATAGGGAGGC
GGTATATATACACCGCGCGCCGGGCCGGGCCACCG