Detailed information on CNT30137220


BLAST search results

BLAST vs Swiss-Prot:
sp|P50156|TIP11_ORYSJ, E-value = 4e-44

BLAST vs NONCODE: nothing found

Expression of CNT30137220

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MLPPRKAPKVTAGFTCPPEMLAPTDTATNRAKACAMAAAISPIGASVPPLSLAAHAQIQD*

>peptide 2 (55 aa)
MSVEMNSASAALRAPVSYTSWWLPTAILLTGIFSQLASSHTPAEAARGRRLAGAER

>peptide 3 (61 aa)
MISMPHGVMPRSGKDMILHVISRANKSSAPIILHLKGRMTPPLSDFLKQNFSRLLVKCFFF*

>peptide 4 (44 aa)
MTISSTSASQQDTPERAKKPVGSPPVAKRRRKQAAVEPRSWAIQ*

>peptide 5 (48 aa)
MHSFYISKLIDDMGSRYHISTVYSSRHHRLTDRLIEMIQSKLTRRSRN*

Sequence

>CNT30137220
CTTGAGACTTGGAACTGAACTGAACTTGAAAATACACCGGGCGAATGCACAGTTTTTACATAAGCAAATTGATTGATGACATGGGTTCCAGATACCATAT
ATCCACGGTTTACAGCTCAAGGCACCACAGACTCACTGACCGACTGATCGAAATGATTCAAAGCAAATTAACGAGGCGATCGAGGAACTAAAAGGAACGA
TTCATGCATGCGATGGAAGCGGTAGGTCGATCTTCACACGACGAACGGAAGGAAGGGAGCCACGGACCAAGCTGGTTGGCTTAGTAGTCGGTGGTGGGGA
GCTGCTCGTGGCTGCGGTTGATGAAGAGGAGCTCGTAGACGACGCCGGCGAGGCCGAAGGTCATGACGATCTCCAGCACCAGCGCCTCCCAGCAGGACAC
GCCGGAGAGGGCGAAGAAGCCGGTGGGGAGCCCGCCGGTGGCGAAGCGGAGGAGGAAGCAGGCGGCGGTGGAGCCGAGAAGCTGGGCGATCCAGTAGAGC
AGGCCGCGGAAGAGGGTGATGTTGCCGCCCAGGAAGGCGCCGAAGGTCACGGCCGGGTTCACGTGCCCGCCCGAGATGTTGGCGCCCACGGACACCGCCA
CGAACAGGGCGAAGGCGTGCGCGATGGCCGCCGCGATCAGCCCGATCGGGGCGTCCGTGCCGCCGCTCAGCTTGGCTGCACACGCACAAATCCAAGACTA
GTCAGATACTGGATCAGTGAAGCAAGTGCTTGATTCCTTAAAAGTTTCCCCATTTATCTCTACCGTTTGGAGAAGCTAGCTGGGTTGTTAATTCAGCTGC
TGCAAGTGTGTCATTTTTTGCTACTTGTGGACACTAGAGAGCACATGGCATGTGTGTGTGTGTGTGTCAGAGTGACTGGATCTGAAGTTCTGAACAGAAG
CTGCTGACTGATGATTTCCATGCCTCATGGAGTCATGCCTAGGAGTGGGAAAGATATGATTCTCCACGTAATCTCAAGGGCAAACAAGTCATCTGCACCA
ATCATTCTCCACCTAAAAGGCCGTATGACACCACCACTTTCTGACTTTCTGAAACAAAACTTCTCTAGGCTTCTAGTAAAGTGTTTCTTCTTTTAAGCGT
GATGGAAAGGGATTTTGTCTCCAAATGCAAGTGGCGGTTTTTTTCCTTTTCTTTGTGGTGAGCGTGCGTACTACGATATATGCAGATTCATGAACTTGCT
CCTAATCTAATCTAATCCATGACATGGTGTACGCGAGGCTGGGAAACTAATTGACGACTCACCGAAGGCGACGCCGGAGCCCTGGCCGGCGAAGACGAAG
ATGAGCGTGGAGATGAACTCCGCGAGCGCCGCCTTGAGGGCGCCGGTCTCGTACACCTCATGGTGGCTCCCCACGGCGATCCTGCTGACCGGCATTTTCT
CTCAGCTGGCTAGCTCTCACACACCTGCAGAAGCAGCTAGAGGAAGAAGATTGGCCGGAGCTGAGAGA