« Back to Asparagus officinalis search


Detailed information on CNT30322744


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677491Asparagus officinalisSetaria viridis25.1524.5790.5985forward
CNT30522256Asparagus officinalisSetaria italica26.3319.0289.8989forward
CNT30547910Asparagus officinalisIpomoea triloba21.0111.0890.1471forward
CNT30628528Asparagus officinalisVigna unguiculata20.717.899070forward
CNT30712649Asparagus officinalisGlycine max20.719.7487.1470forward
CNT30392788Asparagus officinalisTriticum turgidum21.015.4594.3771forward
CNT30568703Asparagus officinalisActinidia chinensis20.124.194.1268forward
CNT3084586Asparagus officinalisVigna radiata20.714.929070forward
CNT30662885Asparagus officinalisTriticum dicoccoides21.0131.1494.3771forward
CNT30721484Asparagus officinalisTriticum spelta21.019.7194.3771forward
CNT30361046Asparagus officinalisSorghum bicolor29.2915.8987.8899forward
CNT30619970Asparagus officinalisCajanus cajan20.7118.2388.5770forward
CNT30579791Asparagus officinalisEchinochloa crusgalli26.637.149090forward
CNT30176366Asparagus officinalisVigna angularis20.7114.6191.4370forward

Expression of CNT30322744

Peptides detected in this lncRNA

>peptide 1 (49 aa)
YATKHCKRRTRCHNVLKAMPEPWPAKTKMRVEMNSARAAFSAPGLYVSW*

>peptide 2 (29 aa)
MSQRTKGHAGALAGEDEDEGGDELGQGRL*

Sequence

>CNT30322744
NNTACGCAACGAAACATTGTAAGCGAAGAACAAGATGTCACAACGTACTAAAGGCCATGCCGGAGCCTTGGCCGGCGAAGACGAAGATGAGGGTGGAGAT
GAACTCGGCCAGGGCCGCCTTTAGTGCACCTGGGTTGTACGTCTCATGGTGAGATCCTATTGCTATTCTTGAGATCGGCATTCTCTCTCTCTCTCTCTCT
ATAAACCACTCTCTTCTTCTTTCTCTCTCTAAATTGTGAGTGGCTTTCTCACACAAGGTTGTTTATATAGTGAAAGGCTAGGAGCAGGTCACCGGGAGTA
GCCCGTTGCGCCCGTATCCACGATTTGAACAAAACGCC