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Detailed information on CNT30514098


BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 4e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677491Juglans regiaSetaria viridis18.1820.8184.7272forward
CNT30382149Juglans regiaManihot esculenta64.1489.1280.71254forward
CNT30628402Juglans regiaVigna unguiculata76.2635.7879.8302forward
CNT30712649Juglans regiaGlycine max37.6320.7281.88149forward
CNT30562195Juglans regiaActinidia chinensis27.2713.2881.48108forward
CNT3084637Juglans regiaVigna radiata69.4423.8979.27275forward
CNT30542059Juglans regiaBrassica napus43.6921.6879.19173forward
CNT30662885Juglans regiaTriticum dicoccoides15.426.7588.5261forward
CNT3075983Juglans regiaBrassica juncea27.0215.2682.24107forward
CNT30619970Juglans regiaCajanus cajan42.9344.2782.35170forward
CNT30706772Juglans regiaPrunus avium29.0432.7682.61115forward
CNT30331344Juglans regiaDioscorea rotundata25.5114.8785.15101forward
CNT30176366Juglans regiaVigna angularis68.1856.3779.63270forward
CNT3050798Juglans regiaCucumis sativus19.1922.9689.4776forward

Expression of CNT30514098

Peptides detected in this lncRNA

>peptide 1 (94 aa)
KPPVENLRSRRVMLPPTKAPKVTAGLTWPPEILAETETATKRPKAWAREAATSPAGVVEPLSVSLLKAMPDPSPANTKMSVEMNSANAAFKASG*

>peptide 2 (47 aa)
QAAGGELKKQEGDVTTDEGAKGNSRVDMATRDIGGDRDRDEKTESVG*

Sequence

>CNT30514098
CAAGCCGCCGGTGGAGAACTTAAGAAGCAGGAGGGTGATGTTACCACCGACGAAGGCGCCAAAGGTAACAGCCGGGTTGACATGGCCACCAGAGATATTG
GCGGAGACCGAGACCGCGACGAAAAGACCGAAAGCGTGGGCTAGGGAAGCAGCCACAAGCCCAGCCGGGGTAGTGGAGCCTTTGTCTGTGAGCTTGTTGA
AGGCCATGCCCGATCCTTCGCCGGCGAACACGAAAATGAGCGTAGAGATGAACTCGGCCAACGCAGCCTTCAAGGCTTCTGGGTGAGTAGCCTCTTGGGG
CCTACCCACAGCAATGTTCCGGATCGGCATGGTTGTCTGGACGGAAATCGAACCGGAGGATTTTGAGCGCACGACAGTTGCGCGTTTTGCTTCTAG