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Detailed information on CNT30594327


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41803|EF1A_MAIZE, E-value = 3e-54

BLAST vs NONCODE:
NONMEST004097, E-value = 1e-73

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672934Eragrostis curvulaSetaria viridis80.2351.4591.9284forward
CNT30698284Eragrostis curvulaQuercus lobata38.747.991.24137forward
CNT30288144Eragrostis curvulaTriticum aestivum73.7370.5491.57261forward
CNT30386294Eragrostis curvulaTriticum turgidum73.7370.9291.57261forward
CNT30564261Eragrostis curvulaActinidia chinensis63.2879.7287.05224forward
CNT30233912Eragrostis curvulaBrassica oleracea56.7889.7390.05201forward
CNT30658093Eragrostis curvulaTriticum dicoccoides73.7359.7391.57261forward
CNT30450104Eragrostis curvulaSaccharum spontaneum26.8422.7889.4795forward
CNT30218533Eragrostis curvulaKalanchoe fedtschenkoi31.9221.7385.84113forward
CNT3067093Eragrostis curvulaLeersia perrieri75.4259.7393.26267forward
CNT30646927Eragrostis curvulaRosa chinensis73.4577.3886.54260forward
CNT30480842Eragrostis curvulaArabidopsis halleri74.0153.888.17262forward
CNT30363108Eragrostis curvulaSorghum bicolor74.2932.8888.97263forward
CNT30483063Eragrostis curvulaChara braunii32.4950.8885.22115forward
CNT30645139Eragrostis curvulaCannabis sativa50.5664.8688.27179forward
CNT3053086Eragrostis curvulaAmborella trichopoda20.911.6786.4974forward
CNT30120727Eragrostis curvulaCitrus clementina73.4547.2790.38260forward
CNT30585568Eragrostis curvulaEchinochloa crusgalli28.2519.4991100forward

Expression of CNT30594327

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVIPLSRSALSLSSTHAYLKDRLFISAASFSNLSITRLSMPPSL*

>peptide 2 (87 aa)
VVLGGLELPQGDIDGDTSLTLSLELVQHPRVLEGPLVHFCGLLLEPLDHTLVNASKLVDQVASGGRFSGIDMANDHNVDVTLLLTHG*

Sequence

>CNT30594327
CAGTAGTACTTGGTGGTCTCGAACTTCCACAGGGCGATATCGATGGTGATACCTCTCTCACGCTCAGCCTTGAGCTTGTCCAGCACCCACGCGTACTTGA
AGGACCGCTTGTTCATTTCTGCGGCCTCCTTCTCGAACCTCTCGATCACACGCTTGTCAATGCCTCCAAGCTTGTAGATCAAGTGGCCAGTGGTGGTCGA
TTTTCCGGAATCGACATGGCCAATGACCACAATGTTGATGTGACTCTTCTCCTTACCCATGGCTGAAGGGAAGACTTAAACTGCGGCAAGAGACAAATCA
ACATATCAGAAACCAGTGAGGATATTATAACTTGATGCCCAGGGACGAAACAAT