CANTATAdb - search

Detailed information on CNT30698284

BLAST search results

BLAST vs Swiss-Prot:
sp|Q41011|EF1A_PEA, E-value = 3e-27

BLAST vs NONCODE:
NONBNAT003157, E-value = 3e-37

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30546688	Quercus lobata	Ipomoea triloba	34.62	23.02	93.94	99	forward
CNT30378189	Quercus lobata	Arabidopsis thaliana	39.51	27.36	91.15	113	forward
CNT30618435	Quercus lobata	Sesamum indicum	48.95	28.51	91.43	140	forward
CNT30727592	Quercus lobata	Corchorus capsularis	48.25	10.44	94.2	138	forward
CNT30380125	Quercus lobata	Manihot esculenta	47.2	11.26	93.33	135	forward
CNT30195335	Quercus lobata	Pisum sativum	46.85	32.13	91.04	134	forward
CNT30503993	Quercus lobata	Nicotiana attenuata	46.85	48.73	90.3	134	forward
CNT30160107	Quercus lobata	Pistacia vera	38.81	24.83	93.69	111	forward
CNT3093993	Quercus lobata	Solanum tuberosum	46.85	25.67	93.28	134	forward
CNT30288144	Quercus lobata	Triticum aestivum	46.85	36.22	88.06	134	forward
CNT30224723	Quercus lobata	Hordeum vulgare	39.86	16.38	92.11	114	forward
CNT30386294	Quercus lobata	Triticum turgidum	46.85	36.41	88.06	134	forward
CNT30564261	Quercus lobata	Actinidia chinensis	49.3	50.18	91.49	141	forward
CNT30590647	Quercus lobata	Musa acuminata	47.9	43.91	89.78	137	forward
CNT30658093	Quercus lobata	Triticum dicoccoides	46.85	30.66	88.06	134	forward
CNT30265127	Quercus lobata	Brassica rapa	50.35	56.47	86.11	144	forward
CNT3010836	Quercus lobata	Zea mays	51.05	43.84	88.36	146	forward
CNT30608684	Quercus lobata	Gossypium raimondii	48.25	32.78	92.75	138	forward
CNT3067093	Quercus lobata	Leersia perrieri	47.9	30.65	89.78	137	forward
CNT30646927	Quercus lobata	Rosa chinensis	42.31	36.01	92.56	121	forward
CNT30684845	Quercus lobata	Triticum urartu	46.85	8.18	91.79	134	forward
CNT30338600	Quercus lobata	Eragrostis tef	45.8	27.29	91.6	131	forward
CNT30480842	Quercus lobata	Arabidopsis halleri	47.9	28.13	91.97	137	forward
CNT30362246	Quercus lobata	Sorghum bicolor	47.9	24.86	89.78	137	forward
CNT30645213	Quercus lobata	Cannabis sativa	40.56	53.46	90.52	116	forward
CNT3024873	Quercus lobata	Populus trichocarpa	46.85	23.76	94.78	134	forward
CNT30120727	Quercus lobata	Citrus clementina	47.2	24.55	92.59	135	forward
CNT30148140	Quercus lobata	Brachypodium distachyon	51.05	38.42	89.73	146	forward
CNT30101083	Quercus lobata	Oryza rufipogon	46.85	25.09	89.55	134	forward
CNT30116334	Quercus lobata	Oryza nivara	46.85	21.97	88.81	134	forward
CNT30594327	Quercus lobata	Eragrostis curvula	47.9	38.7	91.24	137	forward
CNT30726403	Quercus lobata	Lupinus angustifolius	47.9	28.72	91.24	137	forward

Expression of CNT30698284

Peptides detected in this lncRNA

>peptide 1 (33 aa)
PFFKNFGSFSISLPDRLSILVTSSANLTAMWEV*

>peptide 2 (55 aa)
VLQKLWLLLNLLTRSPVNLGHKLSKLNSNVGGVTVKDRSIAIANLTRVPPSQTSQ*

Sequence

>CNT30698284
CCGTTCTTCAAAAACTTTGGCTCCTTCTCAATCTCCTTACCAGATCGCCTGTCAATCTTGGTCACAAGCTCAGCAAACTTAACAGCAATGTGGGAGGTGT
GACAGTCAAGGACAGGAGCATAGCCATTGCCAATCTGACCAGGGTGCCTCCTTCTCAAACCTCTCAATAACACGCTTGTCAATACCTCCAAGCTTGTAGA
TCAAGTGTCCAGTGGTGGTCGACTTTCCAGAGTCAACATGGCCAATGACCACAATGTTGATGTGAACCTTCTCTTTACCCATTCTG