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Detailed information on CNT30218533


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673182Kalanchoe fedtschenkoiSetaria viridis21.9224.5285.96114forward
CNT30378189Kalanchoe fedtschenkoiArabidopsis thaliana16.3520.5883.5385forward
CNT30730167Kalanchoe fedtschenkoiCorchorus capsularis20.9613.9488.07109forward
CNT30195181Kalanchoe fedtschenkoiPisum sativum21.5423.6388.39112forward
CNT30288144Kalanchoe fedtschenkoiTriticum aestivum21.7330.5487.61113forward
CNT30386294Kalanchoe fedtschenkoiTriticum turgidum21.7330.7187.61113forward
CNT30564261Kalanchoe fedtschenkoiActinidia chinensis21.3539.588.29111forward
CNT30590647Kalanchoe fedtschenkoiMusa acuminata22.3137.1886.21116forward
CNT30658093Kalanchoe fedtschenkoiTriticum dicoccoides21.7325.8687.61113forward
CNT30450104Kalanchoe fedtschenkoiSaccharum spontaneum18.0822.5487.2394forward
CNT30608684Kalanchoe fedtschenkoiGossypium raimondii21.3526.3786.49111forward
CNT3067093Kalanchoe fedtschenkoiLeersia perrieri21.7325.2886.73113forward
CNT30646927Kalanchoe fedtschenkoiRosa chinensis21.3533.0487.39111forward
CNT30625732Kalanchoe fedtschenkoiDaucus carota14.2334.5891.8974forward
CNT30689637Kalanchoe fedtschenkoiTriticum urartu21.7311.5887.61113forward
CNT30338600Kalanchoe fedtschenkoiEragrostis tef21.7323.5487.61113forward
CNT30480842Kalanchoe fedtschenkoiArabidopsis halleri21.9223.4183.33114forward
CNT30362246Kalanchoe fedtschenkoiSorghum bicolor21.7320.5186.73113forward
CNT30483063Kalanchoe fedtschenkoiChara braunii17.8841.1583.8793forward
CNT30704438Kalanchoe fedtschenkoiPrunus avium10.9623.6587.7257forward
CNT30645213Kalanchoe fedtschenkoiCannabis sativa21.3551.1588.29111forward
CNT30120727Kalanchoe fedtschenkoiCitrus clementina21.3520.1886.49111forward
CNT30101083Kalanchoe fedtschenkoiOryza rufipogon21.9221.3585.09114forward
CNT30116334Kalanchoe fedtschenkoiOryza nivara21.9218.6985.09114forward
CNT30594327Kalanchoe fedtschenkoiEragrostis curvula21.7331.9285.84113forward

Expression of CNT30218533

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MSNDHNADMNLLLTHGELLQESQASKREVGPTELSLADHIVSFVGMGSLSGASLMKTFATKSLLMYVGLL*

>peptide 2 (40 aa)
MVNCYKNLRQANARLDRQNSHSPIILFPLLVWGHYRVPLS*

Sequence

>CNT30218533
ACGCTTGTCAATTCCTCCAAGCTTGTAGATAAGGTGACCGGTGGTGGTAGACTTCCCTGAGTCGACATGTCCAATGACCACAATGCTGATATGAATCTTT
TACTTACCCATGGTGAATTGCTACAAGAATCTCAGGCAAGCAAACGCGAGGTTGGACCGACAGAACTCTCACTCGCCGATCATATTGTTTCCTTTGTTGG
TATGGGGTCATTATCGGGTGCCTCTCTCATGAAAACGTTTGCAACCAAATCTCTACTCATGTATGTGGGACTTCTATAGCCTCACATTTGCACTCAACTC
CTTTGTCGCCGAATCAATCTGGTCTGAAAAATGAATTCCTAGCATTTGTCTGCCTGTAAGATTCTTGCTTTGGTGTCTGTTTGAATAACAGAGCACCTTT
CCTTAAGTCTGTAAGTGTAAGGTCTTTCTTTCTCAATTGGACACACGTATTTTTGACCTATATATGTGTTAATGTTATGTTTCAGGGATCAGCTGCAGTC
AAATAATTTCAGAAAGTCCG