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Detailed information on CNT30564261


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698284Actinidia chinensisQuercus lobata50.1849.391.49141forward
CNT30378189Actinidia chinensisArabidopsis thaliana46.9831.9689.39132forward
CNT30590647Actinidia chinensisMusa acuminata49.1144.2388.41138forward
CNT30450104Actinidia chinensisSaccharum spontaneum32.7422.0692.3992forward
CNT30218533Actinidia chinensisKalanchoe fedtschenkoi39.521.3588.29111forward
CNT30480842Actinidia chinensisArabidopsis halleri81.1446.8289.91228forward
CNT30362246Actinidia chinensisSorghum bicolor80.7841.288.11227forward
CNT30483063Actinidia chinensisChara braunii40.215083.19113forward
CNT30424540Actinidia chinensisPapaver somniferum80.7829.491.63227forward
CNT3053086Actinidia chinensisAmborella trichopoda28.8312.7893.8381forward
CNT30585568Actinidia chinensisEchinochloa crusgalli35.2319.387.8899forward
CNT30594327Actinidia chinensisEragrostis curvula79.7263.2887.05224forward

Expression of CNT30564261

Peptides detected in this lncRNA

>peptide 1 (57 aa)
LKYQLQNHQLAISMVIPRSRSALSLSKTQAYLNDLLFISAASFSNLSITRLSIPPSL*

>peptide 2 (33 aa)
FEIPASKPPVSNINGDTTLALSLKLVQDPGILE*

Sequence

>CNT30564261
CTTTGAAATACCAGCTTCAAAACCACCAGTTAGCAATATCAATGGTGATACCACGCTCGCGCTCAGCCTTAAGCTTGTCCAAGACCCAGGCATACTTGAA
TGACCTCTTGTTCATCTCAGCAGCCTCCTTCTCGAATCTCTCAATAACACGCTTGTCAATACCTCCAAGCTTGTAGATGAGGTGACCAGTGGTGGTGGAT
TTGCCAGAGTCGACATGGCCAATAACCACAATGCTGATGTGAACCTTCTCCTTACCCATTCTGAACCTTTAGCAGCAAATT