SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30508563 Solanum lycopersicum 1:89793224-89799839 (-) noncoding (-0.495616)2e-47 (sp|Q6DUX3|TCTP_SOLLC) 61 8.58 3Conserved counterparts:
CNT30508562 Solanum lycopersicum 1:75156841-75159375 (-) noncoding (-0.077824)- 98 6.15 2
CNT30508560 Solanum lycopersicum 1:10420814-10426041 (+) noncoding (-0.004096)- 99 8.17 2
CNT30508559 Solanum lycopersicum 1:15324466-15326214 (-) noncoding (-0.0065536)- 64 2.48 1
CNT30508558 Solanum lycopersicum 1:96566294-96568040 (-) noncoding (-0.0004096)- - 52.19 2
CNT30508557 Solanum lycopersicum 1:487575-487846 (-) noncoding (-0.0004096)- 50 6.24 1Conserved counterparts:
CNT30508555 Solanum lycopersicum 1:20817229-20820444 (-) noncoding (-0.1024)- 42 2.43 2
CNT30508553 Solanum lycopersicum 1:89953086-89956346 (-) noncoding (-0.0274432)- 59 18.01 4
CNT30508552 Solanum lycopersicum 1:346866-348012 (+) noncoding (-0.0073728)4e-142 (sp|P29162|ASOL_TOBAC) 94 888.15 2
CNT30508551 Solanum lycopersicum 1:10233654-10233951 (+) noncoding (-0.0004096)- 42 25.55 1
CNT30508550 Solanum lycopersicum 1:88313568-88327268 (-) noncoding (-0.233472)- 57 0 2Conserved counterparts:
CNT30508549 Solanum lycopersicum 1:1604590-1604994 (+) noncoding (-0.012288)- 36 1.01 2
CNT30508548 Solanum lycopersicum 1:2923128-2924038 (+) noncoding (-0.028672)4e-51 (sp|Q9LES2|UBA2A_ARATH) 38 77.73 2
CNT30508547 Solanum lycopersicum 1:51612983-51712391 (+) noncoding (-0.012288)- - 40.17 2
CNT30508545 Solanum lycopersicum 1:90797302-90797903 (-) noncoding (-0.0299008)7e-23 (sp|A9PHC5|METK4_POPTR) 39 5.96 2Conserved counterparts:
CNT30508544 Solanum lycopersicum 1:32098490-32098694 (+) noncoding (-0.0274432)- 68 286.43 1
CNT30508543 Solanum lycopersicum 1:89821127-89823055 (+) coding (0.02)3e-27 (sp|P31843|RRPO_OENBE) 72 2.9 1
CNT30508542 Solanum lycopersicum 1:97920193-97920695 (-) noncoding (-0.0004096)- - 7.32 2
CNT30508541 Solanum lycopersicum 1:88313550-88327268 (-) noncoding (-0.036864)- 59 0 3Conserved counterparts:
CNT30508540 Solanum lycopersicum 1:6419319-6419686 (+) noncoding (-0.0004096)- 53 26.62 1
CNT30508539 Solanum lycopersicum 1:20002383-20004405 (-) noncoding (-0.069632)- 34 10.31 3
CNT30508538 Solanum lycopersicum 1:53286289-53288022 (-) noncoding (-0.090112)- 63 0.98 2Conserved counterparts:
CNT30508537 Solanum lycopersicum 1:440497-441634 (-) noncoding (-0.0004096)- 31 37.13 2Conserved counterparts:
CNT30508535 Solanum lycopersicum 1:86504786-86505749 (-) noncoding (-0.006144)- 50 48.88 2Conserved counterparts:
CNT30508534 Solanum lycopersicum 1:18484385-18486936 (-) noncoding (-0.110592)- 47 20.47 2
CNT30508533 Solanum lycopersicum 1:18484385-18486871 (-) noncoding (-0.0458752)- 67 2.1 2
CNT30508532 Solanum lycopersicum 1:2305656-2306038 (+) noncoding (-0.0004096)3e-27 (sp|Q39228|STP4_ARATH) 50 1.97 2
CNT30508531 Solanum lycopersicum 1:67899824-67903299 (-) noncoding (-0.0118784)- 81 35.31 3
CNT30508530 Solanum lycopersicum 1:53402416-53405573 (-) noncoding (-0.0004096)- 49 3.93 2
CNT30508529 Solanum lycopersicum 1:42408497-42408852 (-) noncoding (-0.200704)- 86 5.86 1Conserved counterparts:
CNT30508528 Solanum lycopersicum 1:90797223-90797942 (-) noncoding (-0.101581)1e-63 (sp|P43280|METK1_SOLLC) 37 2.79 3Conserved counterparts:
CNT30508527 Solanum lycopersicum 1:67243092-67243877 (+) noncoding (-0.0004096)- 50 6.21 2
CNT30508526 Solanum lycopersicum 1:88310717-88327428 (-) noncoding (-0.233472)- 52 3.28 3Conserved counterparts:
CNT30508525 Solanum lycopersicum 1:53286028-53288123 (-) coding (0.114)0 (sp|P29162|ASOL_TOBAC) 73 0.03 5Conserved counterparts:
CNT30508524 Solanum lycopersicum 1:29610168-29612616 (-) noncoding (-0.0004096)- 36 4.82 3
CNT30508523 Solanum lycopersicum 1:18154533-18155618 (+) noncoding (-0.0004096)- 34 23.59 1
CNT30508522 Solanum lycopersicum 1:467101-467552 (-) noncoding (-0.0004096)0.00000000000004 (sp|Q8RX01|Y3567_ARATH) 33 65.67 2
CNT30508521 Solanum lycopersicum 1:86025722-86026922 (-) noncoding (-0.0004096)- 43 2.9 2
CNT30508520 Solanum lycopersicum 1:47650016-47653725 (+) noncoding (-0.090112)- 98 27.15 3
CNT30508519 Solanum lycopersicum 1:88313550-88327268 (-) noncoding (-0.0434176)- 42 3.51 3Conserved counterparts:
CNT30508518 Solanum lycopersicum 1:64302084-64307938 (-) noncoding (-0.0004096)- 40 4.04 2
CNT30508517 Solanum lycopersicum 1:57956886-57957123 (-) noncoding (-0.0004096)- - 7716.49 1
CNT30508516 Solanum lycopersicum 1:346818-349039 (+) noncoding (-0.0004096)- 73 2.27 2
CNT30508515 Solanum lycopersicum 1:45561934-45562332 (+) noncoding (-0.0417792)0.00000002 (sp|P0C2F6|RNHX1_ARATH) 64 0.84 1
CNT30508514 Solanum lycopersicum 1:88310717-88327268 (-) noncoding (-0.233472)- 87 26.63 4Conserved counterparts:
CNT30508513 Solanum lycopersicum 1:92994540-93005973 (+) noncoding (-0.0004096)9e-25 (sp|P38547|RAN2_SOLLC) 30 11.97 2Conserved counterparts:
CNT30508512 Solanum lycopersicum 1:10535916-10539230 (+) coding (0.11)- 74 10.64 3
CNT30508511 Solanum lycopersicum 1:20047223-20049566 (-) noncoding (-0.0004096)- 30 7.39 3
CNT30508510 Solanum lycopersicum 1:440497-441704 (-) noncoding (-0.0004096)- 48 4.98 2Conserved counterparts:
CNT30508508 Solanum lycopersicum 1:75304312-75310250 (+) noncoding (-0.0004096)- 78 3.62 3Conserved counterparts: