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Detailed information on CNT30420528


BLAST search results

BLAST vs Swiss-Prot:
sp|Q38JH8|METK2_SOLTU, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Papaver somniferumSetaria viridis16.4740.5284.08314forward
CNT30520816Papaver somniferumSetaria italica16.6336.6983.91317forward
CNT30641111Papaver somniferumNymphaea colorata33.1664.6978.64632forward
CNT30194995Papaver somniferumPisum sativum16.9533.9383.28323forward
CNT30638840Papaver somniferumCapsicum annuum11.4425.5383.03218forward
CNT3096210Papaver somniferumSolanum tuberosum13.1740.3585.26251forward
CNT30294498Papaver somniferumTriticum aestivum10.1824.2884.02194forward
CNT30225924Papaver somniferumHordeum vulgare12.6442.8183.4241forward
CNT30389985Papaver somniferumTriticum turgidum16.3230.5881.67311forward
CNT30174161Papaver somniferumTrifolium pratense19.5747.2882.57373forward
CNT30144438Papaver somniferumMedicago truncatula15.6961.1582.27299forward
CNT30437887Papaver somniferumAegilops tauschii10.1827.7184.02194forward
CNT30667060Papaver somniferumTriticum dicoccoides9.528.583.43181forward
CNT30471290Papaver somniferumSaccharum spontaneum16.5335.0884.13315forward
CNT3013982Papaver somniferumZea mays8.6656.981.82165forward
CNT30212612Papaver somniferumHelianthus annuus12.3897.9385.59236forward
CNT30686961Papaver somniferumTriticum urartu10.9123.9983.65208forward
CNT30349162Papaver somniferumEragrostis tef20.3642.5984.28388forward
CNT30620815Papaver somniferumCajanus cajan8.4522.0286.96161forward
CNT3055182Papaver somniferumAmborella trichopoda13.2723.9481.03253forward

Expression of CNT30420528

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MLLKVGCNLVIGYSFIVLSRDENSVNPKWDHSTVVISVFNGDLGLSISSITKHVTLVSSSNILWLLGKMTMNTLSNVRALLFNINKNLTFVSIKTNIS*

>peptide 2 (48 aa)
MLNNRSKITVKQNKKQSCIIRQRLTLHTQKQIKNNHMNKSLFRIEILP*

>peptide 3 (30 aa)
MLQTPKTHYQLREVSPRARFPRFFFSIMLN*

>peptide 4 (33 aa)
MVLSSRYWAGMTGSITCFLRSAAIWSLVTVSSC*

>peptide 5 (35 aa)
MLVLVQVSQATLLSGSCSKQASRIASDTWSQSLSG*

Sequence

>CNT30420528
GATTATATTATATGATCAAACAAATTGAAACATCCAAACAATTTGGTGCAGTAAGAAACAATCACTGACTACTCGAAGAAAAGACATTTTCCCTTCAAGA
GAAAAACAAGAACACAATAATAATAATAATAATAATAATAATGCTACAAACTCCTAAAACCCACTACCAACTCAGAGAAGTTTCACCTCGGGCACGGTTT
CCTCGCTTTTTTTTCTCAATTATGTTGAATTAAAAAGTACAGATAGATATGCTGTTTCTTATATTCCCCATATAATTTCCTTATAAACGAGAATCAGAAT
CAAGCTTGCTTGAGGTTCTTGACAGTCTCCCAGGTGAAGTCAGGGTCGTCACGGCCGAAGTGTCCGTAAGCAGCAGTTTTCTGGAACCTGAAGTTACCTC
CTCTCTTCAAGTCAAGGTTAATTGACATCATTCCGGGCCTGAAGTCAAAGTTCTCCTTGATCAGCTTCAATATGTCCTTGTCTGGGATAGTACCTGTCTT
GTAAGTGTCAACAAACACGGACAATGGCTCTGCAACACCGATGGCGTAAGAAACTTGGACAATGCAACGACGGGCAAGTTTAGAAGCAACAATACTCTTG
GCTGCCTGCCTTACAATGTAAGCACCACTGCGATCCACCTTGGTAGGATCCTTTCCAGAGAAAGCACCACCACCGTGAGCACCCCAACCACCGTAGGTGT
CAATAATGATCTTCCTACCAGTTAGTCCAGCATCTCCGTGAGGTCCACCGATGACAAAGCGACCAGATGGGTTCAAGTGAAAGATGGTGTTGTCATCAAG
GTATTGGGCAGGGATGACTGGCTCGATCACATGCTTCTTAAGGTCGGCTGCAATCTGGTCATTGGTTACAGTTTCATCGTGTTGAGTAGAGATGAGAACA
GTGTGAACCCTAAGTGGGATCATAGCACCGTTGTCATTTCTGTATTCAACGGTGACTTGGGTCTTTCCATCAGTAGCATAACCAAACATGTGACCTTGGT
CTCCAGCTCCAATATCCTCTGGCTTCTTGGTAAGATGACCATGAACACCTTGAGCAATGTCAGGGCTCTGTTGTTCAATATAAACAAGAACCTTACATTT
GTCAGCATCAAGACCAACATCAGCTGAAACAAATCCAATTTCCCTGCAGGTATCACGGACGATCTTCTCATAATCGACCTTAGCCTTGGTGGTAATCTCA
CCGAAAACCATAACCATGTTGGTCTTGGTACAGGTTTCACAAGCAACCTTGCTTTCGGGGTCTTGTTCTAAACAAGCATCAAGAATAGCATCAGACACTT
GGTCACAGAGCTTGTCTGGGTGACCCTCATTGACTGATTCTGAGGTAAATAGGAAGGTATCCATCTGTTCATAACAATCAAATATTCAAAGGTTAATTAA
CTTAATACTCATGCACAATTAGGCTTCAAACAATTCATAAAACATATCAAAATATCAGATTTTTATTTCTCCTAGCAGATCTTAAGCATTTCCTCAATTA
TTTGATTAGATTTTCTCATACTCCATAAAATTAAATCTCGGCCAAAGATTTCACTTTGAAAAAACTATAATCATTTAACGTTACACAATTTGTAATTGAC
GAAACCAATCAGAACATAATTACAAATAAATGTTAAATAATAGATCTAAAATAACTGTTAAACAAAACAAAAAACAATCTTGCATAATCAGGCAAAGATT
AACCCTACACACACAAAAACAAATTAAAAATAATCATATGAACAAATCACTCTTTAGAATAGAAATTCTGCCGTAGATCTGAAGTTTTTAAGTAGCACCA
AACGATTAAAGTATATGAAAATCTTTGGAAACGTACTCAGTTGAAATGAATCAAAATTACGAAGAGAGAATGAAAATGATCTTAAAAGATCCGAGGAAAA
GAACGA