SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30508452 Solanum lycopersicum 1:92386799-92387246 (-) noncoding (-0.0004096)0.0000000008 (sp|Q681K2|ATS3A_ARATH) 36 22.4 2Conserved counterparts:
CNT30508450 Solanum lycopersicum 1:53402389-53405573 (-) noncoding (-0.0004096)- 41 7.6 2
CNT30508449 Solanum lycopersicum 1:75128711-75133818 (-) coding (0.027)- 72 23.47 3
CNT30508448 Solanum lycopersicum 1:11014259-11017553 (+) noncoding (-0.028672)- 72 7.11 2
CNT30508447 Solanum lycopersicum 1:69339668-69346050 (+) noncoding (-0.049152)1e-162 (sp|Q01413|E13B_SOLLC) 37 26.65 2
CNT30508446 Solanum lycopersicum 1:13207129-13209805 (-) noncoding (-0.167936)- 71 17.35 2
CNT30508445 Solanum lycopersicum 1:53286028-53288123 (-) noncoding (-0.0466944)0 (sp|P29162|ASOL_TOBAC) 73 135.01 4Conserved counterparts:
CNT30508444 Solanum lycopersicum 1:6970319-6972220 (-) noncoding (-0.0004096)2e-29 (sp|Q9S9U3|RLP53_ARATH) 59 10.1 2
CNT30508443 Solanum lycopersicum 1:93175026-93177113 (-) noncoding (-0.045056)- 71 20.05 2Conserved counterparts:
CNT30508442 Solanum lycopersicum 1:9390442-9390665 (+) noncoding (-0.0004096)0.0000000003 (sp|P82787|DEF19_ARATH) 56 16.06 1
CNT30508441 Solanum lycopersicum 1:1033108-1034615 (+) noncoding (-0.004096)1e-145 (sp|Q8GZC3|FAD2_VERFO) 67 2.05 3Conserved counterparts:
CNT30508440 Solanum lycopersicum 1:5184580-5194293 (-) coding (0.018)- 41 4.16 2Conserved counterparts:
CNT30508439 Solanum lycopersicum 1:94312803-94313951 (-) noncoding (-0.04096)2e-57 (sp|Q04108|PR04_SOLLC) 44 2531.23 1Conserved counterparts:
CNT30508438 Solanum lycopersicum 1:61053967-61054408 (+) noncoding (-0.221184)- 68 11.29 1
CNT30508436 Solanum lycopersicum 1:73281652-73295813 (+) noncoding (-0.045056)- - 1.06 2
CNT30508435 Solanum lycopersicum 1:90727501-90729488 (-) noncoding (-0.385024)- 92 35.99 2
CNT30508433 Solanum lycopersicum 1:81039227-81058520 (+) noncoding (-0.004096)- 62 52.75 2
CNT30508432 Solanum lycopersicum 1:8868436-8869067 (-) noncoding (-0.086016)- 32 9.13 1
CNT30508431 Solanum lycopersicum 1:98386992-98400361 (+) noncoding (-0.0004096)- - 12.59 6Conserved counterparts:
CNT30508430 Solanum lycopersicum 1:74592088-74592539 (+) noncoding (-0.131072)- 56 8.91 1
CNT30508429 Solanum lycopersicum 1:90796901-90797213 (-) noncoding (-0.0811008)2e-47 (sp|P43280|METK1_SOLLC) 63 7.07 2Conserved counterparts:
CNT30508428 Solanum lycopersicum 1:88310717-88327268 (-) noncoding (-0.098304)- 52 0 3Conserved counterparts:
CNT30508427 Solanum lycopersicum 1:81214807-81215153 (+) noncoding (-0.057344)- 54 1523.39 1
CNT30508426 Solanum lycopersicum 1:4336288-4336735 (+) noncoding (-0.0004096)- - 4014.82 2Conserved counterparts:
CNT30508425 Solanum lycopersicum 1:89953086-89954866 (+) noncoding (-0.0028672)- 62 28.56 1
CNT30508424 Solanum lycopersicum 1:53287227-53288022 (-) noncoding (-0.090112)- 56 4.63 2Conserved counterparts:
CNT30508423 Solanum lycopersicum 1:24010481-24012629 (-) noncoding (-0.032768)- 82 15.85 2
CNT30508422 Solanum lycopersicum 1:88310717-88318446 (-) noncoding (-0.0004096)- - 207.36 2Conserved counterparts:
CNT30508421 Solanum lycopersicum 1:70035847-70036149 (-) noncoding (-0.0004096)- 91 0 1
CNT30508420 Solanum lycopersicum 1:11343238-11347381 (-) noncoding (-0.090112)- 68 3.42 2
CNT30508419 Solanum lycopersicum 1:43211306-43214455 (+) noncoding (-0.06144)- 53 4.08 5Conserved counterparts:
CNT30508418 Solanum lycopersicum 1:8978710-8982908 (-) coding (0.071)- 99 3.73 2
CNT30508417 Solanum lycopersicum 1:70619688-70622138 (-) noncoding (-0.0200704)- 60 6.28 2
CNT30508416 Solanum lycopersicum 1:90360183-90360890 (-) noncoding (-0.0004096)- 74 168.79 1
CNT30508415 Solanum lycopersicum 1:47837241-47843915 (-) noncoding (-0.0004096)- 60 5.97 2
CNT30508414 Solanum lycopersicum 1:1021172-1022717 (+) noncoding (-0.0114688)- 81 10.77 3Conserved counterparts:
CNT30508413 Solanum lycopersicum 1:65599458-65611394 (+) noncoding (-0.0462848)- 66 7.9 6
CNT30508412 Solanum lycopersicum 1:83658747-83661147 (-) noncoding (-0.08192)- 45 22.26 2
CNT30508411 Solanum lycopersicum 1:5195225-5196116 (-) noncoding (-0.0004096)- 29 4.74 2
CNT30508410 Solanum lycopersicum 1:70423713-70425835 (-) noncoding (-0.06144)- 52 12.94 1
CNT30508409 Solanum lycopersicum 1:93650318-93652051 (-) noncoding (-0.086016)- 33 0.43 2Conserved counterparts:
CNT30508407 Solanum lycopersicum 1:64090536-64092394 (+) noncoding (-0.012288)- 66 8.46 2
CNT30508406 Solanum lycopersicum 1:22860848-22861339 (-) noncoding (-0.0004096)- - 53.54 1
CNT30508405 Solanum lycopersicum 1:76929533-76930568 (-) noncoding (-0.0004096)- 60 36.57 2Conserved counterparts:
CNT30508403 Solanum lycopersicum 1:97213419-97263045 (+) noncoding (-0.0004096)9e-30 (sp|Q9FJF9|SAU21_ARATH) - 18.01 2Conserved counterparts:
CNT30508402 Solanum lycopersicum 1:96638161-96638510 (+) noncoding (-0.0004096)- 42 526.28 1
CNT30508401 Solanum lycopersicum 1:70544243-70546716 (-) noncoding (-0.0045056)- 67 23.52 1
CNT30508400 Solanum lycopersicum 1:88310722-88327363 (-) noncoding (-0.0270336)- 52 8.92 3Conserved counterparts:
CNT30508399 Solanum lycopersicum 1:97209585-97263045 (+) noncoding (-0.0004096)5e-30 (sp|Q9FJF9|SAU21_ARATH) 46 54.41 2Conserved counterparts:
CNT30508398 Solanum lycopersicum 1:23374533-23375195 (-) noncoding (-0.0004096)- 51 4.5 1