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Detailed information on CNT3095762


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316259Solanum tuberosumCorylus avellana11.8867.0882.71214forward
CNT30549105Solanum tuberosumIpomoea triloba13.4942.7183.54243forward
CNT3020673Solanum tuberosumCitrullus lanatus13.6523.1479.67246forward
CNT30728342Solanum tuberosumCorchorus capsularis11.6531.8280.95210forward
CNT3046104Solanum tuberosumPrunus dulcis6.626.9284.87119forward
CNT30159582Solanum tuberosumPistacia vera3.9427.4185.9271forward
CNT30560769Solanum tuberosumActinidia chinensis9.1624.6383.64165forward
CNT30590722Solanum tuberosumMusa acuminata5.2721.5985.2695forward
CNT30261241Solanum tuberosumBrassica rapa5.1625.5584.9593forward
CNT30609232Solanum tuberosumGossypium raimondii6.7722.9884.43122forward
CNT30211930Solanum tuberosumHelianthus annuus10.6558.0184.38192forward
CNT30354871Solanum tuberosumLactuca sativa4.1622.9485.3375forward
CNT30423559Solanum tuberosumPapaver somniferum7.8229.9482.98141forward
CNT30644102Solanum tuberosumCannabis sativa5.4922.7692.9399forward
CNT3024898Solanum tuberosumPopulus trichocarpa7.7727.0383.57140forward
CNT30319296Solanum tuberosumAsparagus officinalis5.3321.6784.3896forward
CNT30118191Solanum tuberosumCitrus clementina13.3223.183.75240forward
CNT3065055Solanum tuberosumSelaginella moellendorffii4.9424.1285.3989forward

Expression of CNT3095762

Peptides detected in this lncRNA

>peptide 1 (36 aa)
SCSELRVANNFVNMYKVVYILYIILSNPFSLKSILI*

>peptide 2 (39 aa)
MVYPGATTLAPPPSLWYGPTMKPFTTPAPQIAPRHCITM*

>peptide 3 (32 aa)
MMTTPLVQTMELVVALCNLCLFELMYLMVEFP*

Sequence

>CNT3095762
CAGTTGTAGTGAGCTAAGAGTGGCCAATAATTTTGTCAACATGTATAAAGTTGTGTATATACTCTATATAATTTTGTCCAACCCTTTTAGCCTCAAATCC
ATTTTGATATAAAATGTAATAAATAGGAGTTGATTTCCACCATTTTAGGGTAAAAAATGGTGTTGACACCATCTTAGTGTAGTATTCAATACACTACACT
AACTTTTTATATTCATCTCTCTCTTCAATATTAAATTATTATCTTTATTTCATATTTTTATTCTCATATAATCAATCATTCAATAGAAAATTCGCAATGA
CGAATAATGTCACACCAAATCTGGTGTGACACTATTCACACACTACAATAGTGTGAAATTTAGTGTTGGATTGGATTTGGTGTTTTACATCTCCACTCCA
TCACAGTATGTGAATAGTATCACATCAAATTTCTCGATTAAATTATTTTTATTATATTACCTAATTATTTTTCATATCAAATAATCAGTGTAGCGCATTG
GGCACACGATTTTAGTATAAAATTTGGTGTTATGGATCGGAGACGGACCACAACATTCTGACATGGTGAGTCACTCCATTACAAAAAAAGGCCATAGTTA
CAGTAACTTGTCACATGAACATCACTATCTTTAGCCTAACTCAATTAGGTCCACAACATAACCCTACACCAACTAAAAGGACTTGCTGACAAAACCAGAC
ATGCCACATGCTAGCATGACCAATATTTTTGCCTAACTTACCAAAAAGTAAGACCACTTGTCTTACAAGAATTCAACTTTTAACATACATTAAACAGTAT
AATGAACTTTTACCCTACTAGTGTAATTTAACATGTTATAGCAAGTTGGTTGTTTAATACCCTCCCCGTTCACTTCTACTTAGTCACATTTCACTTCTAG
TCAAACTATGTAGTGGTAAGTGTTGGAATAAAGTCACCTATATCTATGGTAATAGCAAGTTGGTTGTTTAATACCCCTCCGTTCACTTTTACTTTATCAC
ATTTCACTTCTCGTCAAACTATGTAATGTAAAGTCACCTATATCTTGACAATTTTTCAAAAACTGCTTCCAAAATCTATGGACAGACGCTAGCTTAGAAC
TAACATGTAAGTATCCATGATAAGCATTCTTGGTATCACAAAGAAGCAATGAAACTACAAGAGGAAACACTTACAGGAACATGTGAGTCTCTGGCATTTC
TTTTGGCATCAGTGGCTGAGAAAACAGTGTAAACAAGGACAAAGGTGCCAATAATCTCAGCACCAAGGCCTGATCCTATGGTGTATCCAGGGGCAACAAC
ATTAGCACCACCACCAAGTCTTTGGTATGGTCCTACCATGAAGCCCTTCACAACACCAGCACCACAGATTGCACCAAGGCACTGCATCACTATGTAGAAA
ACAGACCTGGTCAAGGACAATTTCCTTGCCAAGAAAAGACCCAAGCAATCCCTTGAATACCCACTGAAGAACATAGACTATCAGATCTCTTAAGACCCAT
AACAGTCAAGATTGTGATATACAAGAACAAGAAAGTTGCCATGAACTCTGCAATACCAGCCCTGTAAAAGGACCATGATGACAACTCCCCTGGTTCAAAC
AATGGAGCTGGTGGTGGCTCTTTGTAATCTTTGTCTGTTTGAGCTGATGTACCTAATGGTTGAGTTTCCCTAAACTTGTTAGCTCCAAGCTTAACATCTT
CTTCCTTGTTTTCTGCCATTTTCTCACAAAAGATTGAAGCTTTTTTTTTTTTGCTTTCTTGTGCTGTGAGTAGTCAGTTCAAGAACCAAATTTGGTACTG
AG