Detailed information on CNT30159582


BLAST search results

BLAST vs Swiss-Prot:
sp|P43286|PIP21_ARATH, E-value = 5e-38

BLAST vs NONCODE:
NONPOPT000354, E-value = 8e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728842Pistacia veraCorchorus capsularis28.5721.3390.5474forward
CNT30404916Pistacia veraBeta vulgaris27.4117.5390.1471forward
CNT3095762Pistacia veraSolanum tuberosum27.413.9485.9271forward
CNT30354871Pistacia veraLactuca sativa23.9418.9690.3262forward
CNT30320106Pistacia veraAsparagus officinalis34.364.9886.5289forward
CNT3065055Pistacia veraSelaginella moellendorffii21.6215.1889.2956forward

Expression of CNT30159582

Peptides detected in this lncRNA

>peptide 1 (30 aa)
RDMGVSGTSLGISCRENSVNQDKSSDDLGP*

Sequence

>CNT30159582
ACAGGGACATGGGAGTCTCGGGCACTTCTCTTGGGATCAGTTGCAGAGAAAACAGTGTAAACCAAGACAAAAGTTCCGATGATCTCGGCCCCTAAACCGA
CGCGGGTGCTGTAGCCATCAGCAAGCTCGTTGGCTCCACCGCCATATCTCTTGTAGTGCGAGCTCTGGAAAGCCTTCACTAACGCAACTCCGCAAATGGC
TCCCAAACACTGAGCCACCATGTACATCACCGCCCTCACCACCACCACCACCACTACCA