Detailed information on CNT3046104


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06611|PIP12_ARATH, E-value = 3e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546615Prunus dulcisIpomoea triloba18.129.7488.7580forward
CNT3020673Prunus dulcisCitrullus lanatus21.729.0382.2996forward
CNT30728378Prunus dulcisCorchorus capsularis28.9610.1885.16128forward
CNT3095762Prunus dulcisSolanum tuberosum26.926.684.87119forward
CNT30287172Prunus dulcisTriticum aestivum17.6530.9585.978forward
CNT30564990Prunus dulcisActinidia chinensis26.4727.6682.05117forward
CNT30435838Prunus dulcisAegilops tauschii17.6531.3385.978forward
CNT30658930Prunus dulcisTriticum dicoccoides17.4232.2287.0177forward
CNT30680173Prunus dulcisTriticum urartu17.6532.185.978forward
CNT30706529Prunus dulcisPrunus avium66.0618.9995.89292forward

Expression of CNT3046104

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MALITTTWYKAASAAPMNVPVMGMVAKCTKNTANPIGKGAKIGTWESLALRLASVAEKTV*

>peptide 2 (82 aa)
NLRLGLEGDGSDHNHVVQSCKCCPNERSSDGDGSQVHQEHSEPNRQRCQNRNMGVSGAALGISGRENCVDKNKGANDLSTKP*

>peptide 3 (58 aa)
MGYRVGPATKQLEVAALLEALHHRRTGDRPKRLHDDVENRPCQRQLPGQKQSKRHRRVY

Sequence

>CNT3046104
AATTTAAGACTTGGACTTGAAGGGGATGGCTCTGATCACAACCACGTGGTACAAAGCTGCAAGTGCTGCCCCAATGAACGTTCCAGTGATGGGGATGGTA
GCCAAGTGCACCAAGAACACAGCGAACCCAATAGGCAAAGGTGCCAAAATCGGAACATGGGAGTCTCTGGCGCTGCGCTTGGCATCAGTGGCCGAGAAAA
CTGTGTAGACAAGAACAAGGGTGCCAACGATCTCAGCACCAAGCCCTGATCCCTTGGTGTAGCCATGGGCTACAGAGTTGGCCCCGCCACCAAGCAACTC
GAAGTTGCGGCTCTTCTCGAAGCCCTTCACCACCGCCGCACCGGCGATCGCCCCAAGCGTCTGCATGACGATGTAGAAAACCGCCCTTGTCAGCGACAGC
TTCCGGGCCAAAAACAGTCCAAACGTCACCGCCGGGTTTATG