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Detailed information on CNT30319296


BLAST search results

BLAST vs Swiss-Prot:
sp|S5ZH89|PIP11_MUSAC, E-value = 2e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676770Asparagus officinalisSetaria viridis19.4140.7684.8886forward
CNT30524031Asparagus officinalisSetaria italica20.5433.0983.5291forward
CNT30549116Asparagus officinalisIpomoea triloba26.1940.8587.07116forward
CNT3019525Asparagus officinalisCitrullus lanatus15.831.9687.1470forward
CNT30728342Asparagus officinalisCorchorus capsularis56.2137.7381.53249forward
CNT30525480Asparagus officinalisPhaseolus vulgaris22.124.5883.6798forward
CNT30502187Asparagus officinalisNicotiana attenuata23.252.8385.44103forward
CNT30709876Asparagus officinalisGlycine max19.4124.0989.5386forward
CNT3044723Asparagus officinalisPrunus dulcis22.1210.7385.7198forward
CNT3095762Asparagus officinalisSolanum tuberosum21.675.3384.3896forward
CNT30560769Asparagus officinalisActinidia chinensis56.4337.3182.4250forward
CNT30590285Asparagus officinalisMusa acuminata9338.6582.04412forward
CNT30145515Asparagus officinalisMedicago truncatula11.062089.849forward
CNT30599410Asparagus officinalisFraxinus excelsior20.0913.4286.5289forward
CNT30477407Asparagus officinalisArabidopsis halleri20.9914.5882.893forward
CNT30354871Asparagus officinalisLactuca sativa16.9322.9485.3375forward
CNT30644102Asparagus officinalisCannabis sativa27.0927.5986.67120forward
CNT3024497Asparagus officinalisPopulus trichocarpa20.7732.7486.9692forward
CNT30118191Asparagus officinalisCitrus clementina53.522.8181.86237forward
CNT3065055Asparagus officinalisSelaginella moellendorffii25.7330.8985.96114forward

Expression of CNT30319296

Peptides detected in this lncRNA

>peptide 1 (93 aa)
RSGGKYTYRDMRVPGTPLGISSREDGVDKNEGAHNLSTQSITLGVAGGHDVGPTALRLVESLLVALDNTSTTNCTQALHHHVEDGSGQGQFSC*

Sequence

>CNT30319296
AGAAGCGGAGGAAAATATACTTACAGGGACATGAGAGTCCCTGGCACTCCTCTTGGCATCAGTAGCAGAGAAGACGGTGTAGACAAGAACGAAGGTGCCC
ACAATCTCAGCACCCAATCCATCACCCTTGGTGTAGCCGGGGGCCACGACGTTGGCCCCACCGCCCTGAGACTCGTAGAGTCCCTTCTGGTAGCCCTTGA
CAACACCAGCACCACAAATTGCACCCAGGCACTGCATCACCATGTAGAAGATGGCTCTGGTCAGGGACAGTTTTCTTGCTAAGAACAGGCCAAAGGCCCA
AGCGATCCCTTGAATGCCCACGGTGGAGCACTTGGATGGGGACTTGACAACCCCCATGACAGTGAGAATGGTGATGTAAAGGAACAAGAAGGTAGCCATG
AACTCAGCAATCCCTGCTCTGTAGAAAGACCATGACTTGAGCT