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Detailed information on CNT30590722


BLAST search results

BLAST vs Swiss-Prot:
sp|S5ZH89|PIP11_MUSAC, E-value = 1e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524031Musa acuminataSetaria italica40.4564.7384.27178forward
CNT30640424Musa acuminataNymphaea colorata41.3621.987.91182forward
CNT30515171Musa acuminataJuglans regia32.0514.9482.98141forward
CNT3020673Musa acuminataCitrullus lanatus2510.3583.64110forward
CNT30631135Musa acuminataVigna unguiculata25.689.6382.3113forward
CNT3044723Musa acuminataPrunus dulcis26.8212.9281.36118forward
CNT3095762Musa acuminataSolanum tuberosum21.595.2785.2695forward
CNT30394052Musa acuminataTriticum turgidum42.9513.2182.01189forward
CNT30564991Musa acuminataActinidia chinensis46.8250.9983.5206forward
CNT30542732Musa acuminataBrassica napus28.4118.681.6125forward
CNT30437220Musa acuminataAegilops tauschii31.8224.4885140forward
CNT30463151Musa acuminataSaccharum spontaneum32.7328.6385.42144forward
CNT30680472Musa acuminataTriticum urartu32.0520.2385.82141forward
CNT30364641Musa acuminataSorghum bicolor35.6820.2885.99157forward
CNT30706529Musa acuminataPrunus avium32.059.1784.4141forward
CNT30644102Musa acuminataCannabis sativa25.4525.7587.5112forward
CNT3038888Musa acuminataCucumis melo27.2711.5984.17120forward
CNT30495761Musa acuminataDigitaria exilis26.5929.8582.91117forward
CNT3050391Musa acuminataCucumis sativus27.2718.8785120forward

Expression of CNT30590722

Peptides detected in this lncRNA

>peptide 1 (94 aa)
HGNMRVPGVSFGVSSRENSVDEDEGADDLSTQAITLGVARSHDVSSATVALIEPLLVPLDHTGTADGAQAIPWMPTVEHLLLDLTTPMTVRMVM*

Sequence

>CNT30590722
CACGGGAACATGAGAGTCCCTGGCGTTTCTTTTGGCGTCAGTAGCAGAGAAAACAGTGTAGACGAGGATGAAGGTGCCGACGATCTCAGCACCCAGGCCA
TCACCCTTGGTGTAGCCAGGAGCCACGACGTTAGCTCCGCCACCGTTGCTCTCATAGAGCCCCTTCTGGTACCCCTTGACCACACCGGCACCGCAGATGG
CGCCCAGGCAATCCCTTGGATGCCCACCGTGGAGCACTTGCTGTTGGACTTGACCACGCCCATGACCGTGAGGATGGTGATGTAGAGGAAGAGGAAGGTA
GCCATGAACTCCGCTATCCCAGCCCTGTAGAAGGACCAAGAGGTGAGCTCCCCGGGCTCGAACAAGGGAGCCGGTGGAGGTTCCTTGTAGTCCTTGTCGC
TCTGCGCTGCCGTTCCTATCGGCTGCCTCTCCGAGAACTT