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Detailed information on CNT30641283


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690595Nymphaea colorataOryza sativa9.7521.3282.2191forward
CNT30522989Nymphaea colorataSetaria italica15.0131.6585.03294forward
CNT30729011Nymphaea colorataCorchorus capsularis7.7622.6581.58152forward
CNT30564031Nymphaea colorataActinidia chinensis9.7528.2580.1191forward
CNT3085829Nymphaea colorataVigna radiata4.8525.4783.1695forward
CNT30552330Nymphaea colorataOryza glaberrima16.4944.5584.83323forward
CNT30437900Nymphaea colorataAegilops tauschii10.3146.1284.16202forward
CNT3061869Nymphaea colorataArabidopsis lyrata7.9625.3780.13156forward
CNT3074945Nymphaea colorataBrassica juncea14.6530.9379.79287forward
CNT30458863Nymphaea colorataSaccharum spontaneum23.0732.3682.3452forward
CNT30135152Nymphaea colorataLolium perenne14.0442.4484.36275forward
CNT3015043Nymphaea colorataZea mays10.9743.8884.19215forward
CNT3066783Nymphaea colorataLeersia perrieri10.3161.9681.19202forward
CNT30649836Nymphaea colorataRosa chinensis12.9122.5579.05253forward
CNT30683148Nymphaea colorataTriticum urartu9.935.9984.54194forward
CNT30720854Nymphaea colorataTriticum spelta7.5521.888.51148forward
CNT30479170Nymphaea colorataArabidopsis halleri5.9727.6683.76117forward
CNT30364112Nymphaea colorataSorghum bicolor14.3431.9383.27281forward
CNT30355687Nymphaea colorataLactuca sativa9.728.782.11190forward
CNT30579988Nymphaea colorataEchinochloa crusgalli6.7441.1286.36132forward

Expression of CNT30641283

Peptides detected in this lncRNA

>peptide 1 (41 aa)
AGSWRSSCEWPPPRSVLQRGRRWRARQLGRSSEGPGQCTRQ*

>peptide 2 (31 aa)
WFMAFKLRVASSSLCPPERKTMAGTAAGTVL*

>peptide 3 (55 aa)
MTPLRHSREPGVQKRSSRRARRLDSTFSTLMLARRLPIVPVLSSAARIPLPGVPM*

>peptide 4 (60 aa)
MHKKANKARSRCKRGCRSQKITRKRKTKVKKKKTRGQIDKPAPRITLRKHQNAPEALDLP*

>peptide 5 (78 aa)
LVHGVQVASGLLLALSSREEDDGGHGSWDGPLKGPDSVLGNDLWRDLGGVGAWGDHVRLEEGALEENMVVVEGLIAGS*

>peptide 6 (88 aa)
MQKRMQITKNNKEKKNKGKKKKDSRTDRQTRTTYNPKKTPKRSGGTRSALMKANSTKESSKTDQPAERSASSRFQRLQTRTAKAGEVK*

>peptide 7 (34 aa)
MSNIPSPVSSFCSPKREKPSAFFLIMCLKEDFKN*

>peptide 8 (34 aa)
MTSGVTLAESEPGVTMFGLRRVPSRRTWWSLRAL*

>peptide 9 (38 aa)
MDGELRGLVGSDLEDGPPFGEAGTCVIVLRTAFAEAVF*

Sequence

>CNT30641283
GCTGGTTCATGGCGTTCAAGTTGCGAGTGGCCTCCTCCTCGCTCTGTCCTCCAGAGAGGAAGACGATGGCGGGCACGGCAGCTGGGACGGTCCTCTGAAG
GGCCCGGACAGTGTACTCGGCAATGACCTCTGGCGTGACCTTGGCGGAGTCGGAGCCTGGGGTGACCATGTTCGGCTTGAGGAGGGTGCCCTCGAGGAGA
ACATGGTGGTCGTTGAGGGCCTTATAGCAGGCAGCTAGGACGCGCTCCGTCACATAGGCGCAGCGGTCGATGTCGTGAGAGCCGTCGACAAGGATCTCCG
GTTCGACGATGGGGACGAGACCGTTCTCCTGGCAGATGCTAGCATAGCGAGCGAGGCCGTAGGCGTTCTCATGGATGGCGAGCTCAGAGGGCTCGTTGGG
TCCGATCTTGAGGACGGCCCTCCATTTGGCGAAGCGGGCACCTGCGTTATAGTACTCCGCACAGCGTTCGCCGAGGCCGTCTTCTGATACAGGGTCTCCT
CGAAGAGGATGACTCCGCTCAGGCATTCAAGAGAGCCAGGAGTGCAGAAGAGGAGCTCGCGGAGGGCCCGGCGGTTGGACTCAACGTTCTCGACGTTGAT
GCTGGCAAGACGCTTGCCGATCGTGCCAGTGCTCTCGTCGGCAGCAAGGATACCCTTGCCCGGGGTGCCGATGTAGGCCGCGTTGGCGATGAGCTCATCT
GAGTAGAACATGGGAGAAGAAAGACGGTGGCTTCGTCAAACAACAAGATCCGCCCAATAATCAAACAGCAAAGGGATTAAAATTTGTATCTAAACCACCA
TTGATAAGAGGGGATTTAACATGGTATGGTCGGCAGAACATTCGGGCCAGAAGAGGTACTAGACATCTAAAATGAGAGACAAATAGATCCCCTTGATCCT
CGGATCAAAATGAACAACAAAACGTTTGAGAAGAACGACAACCATTTGATGGAAAGACCAATAATACGCAGAGACGTTAATCCATAACAACAAGTTCGCT
ACCACCAAGGGAGAAATGAAGATGGAAGATCGATAAAATGAGAAAACCAGCAGAAAATGTAAGAAAATAAGTAAATATTGAACAATGGATGATAATAAGA
AGCAGAATAAGAAGATCATATGCAGAAAATATCAGAGAACAAAGAGTGAATAATTTGGATTAAAAAGCGTAATTAAACAAATACAAACAGGATAGAAAAT
AGGTGCAGTTTGGTGTTTTTGGATCGTACAGAGAAAAGGAAAAGAAGAAGAAATATCTATGTCCAATATCCCATCCCCTGTTTCTTCTTTTTGTAGTCCG
AAACGGGAAAAACCTTCTGCCTTTTTCCTAATCATGTGCCTCAAGGAAGATTTCAAGAACTAAAAAAAAAAATTAGAACCCGCTTGAACCCTAAAAATAA
TACTCTTTAGGTGTTGAGAACCGGATTGTGATGTTCAAGAAATGCGAACTGAAAAAGAAAATGGACAAAGAAGGCCAAGTAAACTGATCTATCTACGGAA
GCAACGGATCTGTGAAAACCAATAGCCACAACCCAGCATAGAGCACTGTGTACGAACCAAACCGAAGGTTAAGGTCCATCCAAAACCAGATATGCACAAA
AAGGCAAACAAAGCCAGATCTAGATGCAAAAGAGGATGCAGATCACAAAAAATAACAAGGAAAAGAAAAACAAAGGTAAAAAAAAAAAAGACTCGAGGAC
AGATCGACAAACCCGCACCACGTATAACCCTAAGAAAACACCAAAACGCTCCGGAGGCACTAGATCTGCCCTAATGAAAGCGAACTCCACAAAGGAAAGC
TCGAAAACAGATCAGCCCGCGGAGCGATCTGCCTCCAGTCGCTTCCAGAGGCTCCAAACGAGAACAGCCAAGGCAGGAGAAGTGAAATAAAGAATGCGAT
CCACATCAAACTCACTCAACGAACAAACTCAGGGTAACCAAAAGAGAAAGAGCGAGAGA