CANTATAdb - search

Detailed information on CNT30355687

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJQ9|ALFC6_ARATH, E-value = 1e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30641283	Lactuca sativa	Nymphaea colorata	28.7	9.7	82.11	190	forward
CNT30374848	Lactuca sativa	Arabidopsis thaliana	16.31	24.27	81.48	108	forward
CNT3074945	Lactuca sativa	Brassica juncea	26.28	18.75	79.31	174	forward
CNT30135152	Lactuca sativa	Lolium perenne	20.54	20.99	83.09	136	forward
CNT3036222	Lactuca sativa	Cucumis melo	16.31	29.51	83.33	108	forward

Expression of CNT30355687

Peptides detected in this lncRNA

>peptide 1 (43 aa)
PYTLQEKLLELSSHSLLFLPTPSKYSAVKHDRMRKSKSMASFL*

>peptide 2 (38 aa)
MVVVESFVAGGEDTLGYVSAFVDVVRSVDEDFWFNNGD*

>peptide 3 (38 aa)
MIAYLANPFAFSLMASCDGSFGPILRTARHFANLAPAA*

Sequence

>CNT30355687
TCCCTTACACCTTGCAAGAAAAGCTTCTTGAGCTTTCTTCACATTCTCTTCTTTTCCTCCCCACGCCTTCAAAGTACTCTGCTGTAAAGCACGACCGAAT
GAGAAAGTCAAAGTCCATGGCTTCTTTCCTTTGAACTGGTTCATCGCGTTGAGGAAGACAACCGCCGGGACAGCTGGCGGCATGGTGCGTTGAAGAGCTC
TGACGGTGTACTCCGCCACGACTTCCGGTGCGACCTTTTTGGCGTCGGAGCCGGGTGTGACCATGTTGGGTTTCAGAAGGGTGCCTTCTAGAAGAACATG
GTGGTCGTTGAGAGCTTTGTAGCAGGCGGCGAGGACACGCTCGGTTACGTCAGCGCATTTGTTGATGTCGTGAGATCCGTCGACGAGGATTTCTGGTTCA
ACAATGGGGACTAGACCGTTTTCTTGACAGATGATTGCGTACCTTGCTAATCCGTTTGCGTTTTCGTTAATGGCGAGCTGTGATGGTTCGTTTGGGCCGA
TTTTAAGAACAGCGCGCCATTTTGCGAACCTGGCGCCGGCGGCGTAGTACTGTGCGCATCTCTGGGCGAGGCCGTCGAGACCTTGGGTGGTGGTTTCGCC
GTCGGTTCCGGCGAGTTCGACGGTGCCCTTGTCGACTTTGATTCCGGGGAGGACATTGGCTT