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Detailed information on CNT30591720


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547369Musa acuminataIpomoea triloba25.0810.7788.7580forward
CNT30379424Musa acuminataManihot esculenta24.7626.0789.8779forward
CNT30708521Musa acuminataGlycine max22.8824.0190.4173forward
CNT3045920Musa acuminataPrunus dulcis24.4525.4989.7478forward
CNT30158859Musa acuminataPistacia vera24.7627.5391.1479reverse complement
CNT30566737Musa acuminataActinidia chinensis24.7631.7391.1479reverse complement
CNT30509042Musa acuminataSolanum lycopersicum28.8430.0784.7892forward
CNT30172978Musa acuminataTrifolium pratense23.5124.5190.6775forward
CNT30597892Musa acuminataFraxinus excelsior22.5723.6188.8972reverse complement
CNT30232760Musa acuminataAnanas comosus2114.6988.0667forward
CNT30204138Musa acuminataHelianthus annuus26.3327.4588.184forward
CNT30128358Musa acuminataCorymbia citriodora22.5726.0988.8972reverse complement
CNT30717425Musa acuminataMalus domestica golden21.6322.5592.7569forward
CNT30155101Musa acuminataPrunus persica24.4514.0389.7478forward
CNT30572433Musa acuminataVitis vinifera21.6312.5288.4169reverse complement
CNT30704539Musa acuminataPrunus avium24.767.3789.8779reverse complement
CNT30644781Musa acuminataCannabis sativa21.9430.0491.4370reverse complement
CNT3030049Musa acuminataTheobroma cacao24.7625.7391.1479forward
CNT30724469Musa acuminataLupinus angustifolius23.224.2687.8474forward

Expression of CNT30591720

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PRSPSRVALACNPSGGNEVEGCCGQFEWVG*

Sequence

>CNT30591720
CCTCGATCGCCGAGCCGGGTAGCGCTGGCTTGTAACCCGAGCGGGGGCAACGAGGTGGAGGGATGTTGTGGTCAGTTCGAATGGGTTGGGTGAGGTCGTG
CTAGACTTGGCTTGCCCGTTCCAAGTCAGGTAGCTGAGCTATGTGGCCCGAACGAAGGTCCGAGCCATCTGGGATTCTAAAGCAGAGGGCACCGCGTCAG
GCTGGCTTCACAGAGCAGCGATAACCTCCCGCTCTTGACGGTGGAAGGATAACAGGCCGGTGCACGCCGCACCCGCAATGCCTATCGGACTACCACTGAC
TAGACCACCACTTTTTTCC