Detailed information on CNT30155101


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316252Prunus persicaCorylus avellana27.8843.7987.74155reverse complement
CNT30518096Prunus persicaJuglans regia14.0322.6188.4678reverse complement
CNT30373911Prunus persicaArabidopsis thaliana28.0652.1782.05156reverse complement
CNT30272829Prunus persicaChenopodium quinoa13.1323.7891.7873forward
CNT3070907Prunus persicaQuercus suber26.846.5684.56149reverse complement
CNT30382474Prunus persicaManihot esculenta31.6558.0985.23176forward
CNT30404033Prunus persicaBeta vulgaris23.9243.0483.46133forward
CNT3045920Prunus persicaPrunus dulcis55.0410098.69306forward
CNT30158859Prunus persicaPistacia vera25.5449.4886.62142reverse complement
CNT3092489Prunus persicaSolanum tuberosum15.8329.6387.588forward
CNT30566737Prunus persicaActinidia chinensis18.1740.5686.14101reverse complement
CNT30591720Prunus persicaMusa acuminata14.0324.4589.7478forward
CNT3084328Prunus persicaVigna radiata16.5530.2685.8792forward
CNT30212879Prunus persicaHelianthus annuus26.2648.583.56146forward
CNT30128358Prunus persicaCorymbia citriodora28.7857.9782.5160reverse complement
CNT30718148Prunus persicaMalus domestica golden36.5166.7887.68203forward
CNT30408305Prunus persicaPapaver somniferum12.0523.1891.0467reverse complement
CNT30706625Prunus persicaPrunus avium99.822992.79555forward
CNT30644548Prunus persicaCannabis sativa15.8327.3389.7788forward
CNT3058749Prunus persicaAmborella trichopoda10.4321.2594.8358forward
CNT30121042Prunus persicaCitrus clementina14.0325.9191.0378reverse complement
CNT30176611Prunus persicaVigna angularis15.6528.8187.3687forward

Expression of CNT30155101

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MWLERRLWVSWFLERREPRKAGFTEQRLPPALGSGRITGRCHSDPPWPARLSQLNQTFLRFSSSDLGSYNAKIKRCRTKVTQTLQE*

>peptide 2 (29 aa)
PSFVTQAYNPSGGFEVLEHWLSIRGSVPG*

>peptide 3 (33 aa)
MILVEGRGSEFVCYCLQTTHSLVDCLFHHLPRG*

Sequence

>CNT30155101
GCCGAGCTTTGTAACGCAAGCTTATAACCCAAGTGGGGGCTTTGAGGTTCTGGAACATTGGCTCAGTATTAGAGGGTCGGTTCCGGGTTGACTATCTTCT
GGCTCGCCCATTCCAAGCCAGGAGTTGACCCATGTGGCTCGAGCGAAGGCTCTGGGTCTCTTGGTTCCTAGAGAGGAGGGAACCGCGTAAGGCTGGCTTC
ACAGAGCAACGATTACCTCCCGCTCTTGGCAGTGGAAGGATAACGGGTCGGTGTCACTCGGATCCACCGTGGCCCGCTAGACTGTCCCAATTGAACCAAA
CCTTTTTGCGGTTTTCTTCCTCAGATTTGGGAAGCTACAATGCCAAAATCAAAAGATGCAGGACAAAAGTGACTCAAACACTGCAAGAGTGACTGCTTCT
ACTTCTCTCAACTTCTCATGATCCTTGTTGAGGGAAGAGGAAGCGAATTTGTTTGCTATTGCCTTCAAACTACCCACAGCCTTGTTGATTGTCTTTTTCA
CCATCTTCCTAGAGGATGACATCCTTGGCACTGCTGCAAACATCCAAGAGTCTGAC