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Detailed information on CNT30204138


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30591720Helianthus annuusMusa acuminata27.4526.3388.184forward
CNT3086859Helianthus annuusVigna radiata23.223.5190.1471forward
CNT30236426Helianthus annuusBrassica oleracea26.827.0685.3782forward
CNT30172978Helianthus annuusTrifolium pratense23.5323.5388.8972forward
CNT3029804Helianthus annuusTheobroma cacao28.7628.6686.3688forward
CNT3024632Helianthus annuusPopulus trichocarpa34.6434.9886.79106forward
CNT30175002Helianthus annuusVigna angularis23.223.7588.7371forward

Expression of CNT30204138

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PGLVTLAYNSSEGIKDCWTVTQPSQIGPTVA*

Sequence

>CNT30204138
ACCGGGCTTGGTAACGCTTGCCTATAACTCAAGTGAGGGTATTAAAGATTGTTGGACAGTGACTCAACCCAGTCAGATTGGTCCCACTGTTGCATAATCC
GGCTTGCCCGTTCCAAGTTGTGAGTTGGACCGTGTGACTTGAGCGAAAGCTTGGGCCACATGGTTCCTAAAGCAGGGGGCACTGCGTAAGGCTGGTTTCA
CAGAGCTGCGAAAACCCCTCGCTCATGACAGTGGAAGGATAACAGGCCGGGGCTCCATGGGTCCATAATATCTACCGGGTTGTCTCAAATGAACAACCAT
CTTTTT