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Detailed information on CNT30128358

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30535409	Corymbia citriodora	Eucalyptus grandis	57.25	55.05	87.34	158	forward
CNT30316252	Corymbia citriodora	Corylus avellana	31.16	24.29	89.53	86	forward
CNT30547454	Corymbia citriodora	Ipomoea triloba	32.25	27.13	92.13	89	reverse complement
CNT30515285	Corymbia citriodora	Juglans regia	31.88	11.62	89.77	88	reverse complement
CNT30703316	Corymbia citriodora	Quercus lobata	55.8	50.16	83.12	154	reverse complement
CNT30501219	Corymbia citriodora	Coffea canephora	30.07	26.18	85.54	83	forward
CNT30618136	Corymbia citriodora	Sesamum indicum	30.8	14.94	87.06	85	forward
CNT30272829	Corymbia citriodora	Chenopodium quinoa	27.9	25.08	90.91	77	reverse complement
CNT30727389	Corymbia citriodora	Corchorus capsularis	26.09	32.14	94.44	72	reverse complement
CNT3069056	Corymbia citriodora	Quercus suber	52.9	13.81	82.88	146	reverse complement
CNT30381846	Corymbia citriodora	Manihot esculenta	29.71	26.97	90.24	82	reverse complement
CNT30404033	Corymbia citriodora	Beta vulgaris	31.52	28.16	87.36	87	reverse complement
CNT30526259	Corymbia citriodora	Phaseolus vulgaris	28.62	25.9	88.61	79	reverse complement
CNT30629861	Corymbia citriodora	Vigna unguiculata	26.09	15.19	90.28	72	reverse complement
CNT30507384	Corymbia citriodora	Nicotiana attenuata	25.36	22.95	90	70	reverse complement
CNT30711674	Corymbia citriodora	Glycine max	21.74	19.74	93.33	60	reverse complement
CNT3044357	Corymbia citriodora	Prunus dulcis	32.25	29.28	91.01	89	reverse complement
CNT30158859	Corymbia citriodora	Pistacia vera	39.13	37.63	88.89	108	forward
CNT30563209	Corymbia citriodora	Actinidia chinensis	36.96	30.36	87.25	102	forward
CNT30591720	Corymbia citriodora	Musa acuminata	26.09	22.57	88.89	72	reverse complement
CNT3086859	Corymbia citriodora	Vigna radiata	26.45	24.17	89.04	73	reverse complement
CNT30544072	Corymbia citriodora	Brassica napus	22.46	20.53	90.32	62	reverse complement
CNT30509042	Corymbia citriodora	Solanum lycopersicum	31.16	28.1	84.88	86	reverse complement
CNT30662869	Corymbia citriodora	Triticum dicoccoides	23.91	21.78	90.91	66	reverse complement
CNT3059713	Corymbia citriodora	Arabidopsis lyrata	32.61	29.32	86.67	90	reverse complement
CNT3076575	Corymbia citriodora	Brassica juncea	34.42	30.25	84.21	95	reverse complement
CNT30260145	Corymbia citriodora	Brassica rapa	22.46	20.53	90.32	62	reverse complement
CNT30597892	Corymbia citriodora	Fraxinus excelsior	32.97	29.84	85.71	91	forward
CNT30232760	Corymbia citriodora	Ananas comosus	28.62	17.32	87.34	79	reverse complement
CNT30652801	Corymbia citriodora	Rosa chinensis	39.86	35.95	87.27	110	reverse complement
CNT30213201	Corymbia citriodora	Helianthus annuus	24.28	21.82	88.06	67	reverse complement
CNT30719063	Corymbia citriodora	Malus domestica golden	38.77	13.99	87.85	107	reverse complement
CNT30479039	Corymbia citriodora	Arabidopsis halleri	29.71	26.8	86.59	82	reverse complement
CNT30155101	Corymbia citriodora	Prunus persica	57.97	28.78	82.5	160	reverse complement
CNT30572433	Corymbia citriodora	Vitis vinifera	27.9	13.97	87.01	77	forward
CNT30704539	Corymbia citriodora	Prunus avium	32.25	8.3	88.76	89	forward
CNT30644781	Corymbia citriodora	Cannabis sativa	31.16	36.91	93.02	86	forward
CNT3030049	Corymbia citriodora	Theobroma cacao	30.8	27.69	90.59	85	reverse complement
CNT3053266	Corymbia citriodora	Amborella trichopoda	28.26	25.32	87.18	78	reverse complement
CNT3024632	Corymbia citriodora	Populus trichocarpa	21.74	19.8	93.33	60	reverse complement
CNT30318775	Corymbia citriodora	Asparagus officinalis	23.91	13.55	90.91	66	forward
CNT30120686	Corymbia citriodora	Citrus clementina	29.35	26.91	87.65	81	forward
CNT30175002	Corymbia citriodora	Vigna angularis	29.35	27.09	90.12	81	reverse complement
CNT30334668	Corymbia citriodora	Cynara cardunculus	25.36	11.78	88.57	70	reverse complement
CNT3050759	Corymbia citriodora	Cucumis sativus	22.83	20.59	88.89	63	reverse complement

Expression of CNT30128358

Peptides detected in this lncRNA

>peptide 1 (90 aa)
KWWFGRLSLLGHDGSGWHRPVILPLPGGGGFRCSVKPASRGPLHSKTSAAQAFARPARINSRLGTGEPEDGHNKPGPQELSLCSTTLMPPL

>peptide 2 (34 aa)
SGGSVGLAYWAMMGLGGTGPLSFHCREGEVFAAL*

Sequence

>CNT30128358
AAAGTGGTGGTTCGGTAGGCTTAGCCTATTGGGCCATGATGGGTCTGGGTGGCACCGGCCCGTTATCCTTCCACTGCCGGGAGGGGGAGGTTTTCGCTGC
TCTGTGAAGCCAGCCTCACGCGGACCCCTCCACTCTAAGACCAGCGCGGCCCAGGCCTTCGCCCGGCCCGCACGGATCAACTCTCGGCTTGGAACGGGCG
AGCCAGAAGATGGCCACAACAAACCCGGCCCGCAGGAGCTGAGCCTATGTTCCACCACTTTGATGCCCCCTCTCGG