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Detailed information on CNT30597892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547454Fraxinus excelsiorIpomoea triloba30.8228.6686.1794reverse complement
CNT30617951Fraxinus excelsiorSesamum indicum53.1117.1283.95162reverse complement
CNT30506288Fraxinus excelsiorNicotiana attenuata34.134.2184.62104reverse complement
CNT3094411Fraxinus excelsiorSolanum tuberosum36.0736.9185.45110forward
CNT30566737Fraxinus excelsiorActinidia chinensis24.2629.7287.8474forward
CNT30591720Fraxinus excelsiorMusa acuminata23.6122.5788.8972reverse complement
CNT30538642Fraxinus excelsiorBrassica napus27.5435.7486.984reverse complement
CNT30509984Fraxinus excelsiorSolanum lycopersicum48.8551.3883.89149forward
CNT30261746Fraxinus excelsiorBrassica rapa27.5435.7486.984reverse complement
CNT30128358Fraxinus excelsiorCorymbia citriodora29.8432.9785.7191forward
CNT30714740Fraxinus excelsiorMalus domestica golden23.6123.3886.1172reverse complement
CNT30153271Fraxinus excelsiorPrunus persica21.3121.4589.2365reverse complement
CNT30706625Fraxinus excelsiorPrunus avium28.854.686.3688reverse complement
CNT30644781Fraxinus excelsiorCannabis sativa32.7942.9287100forward
CNT3058191Fraxinus excelsiorAmborella trichopoda25.925.7386.0879reverse complement
CNT30176071Fraxinus excelsiorVigna angularis21.3120.7787.6965reverse complement

Expression of CNT30597892

Peptides detected in this lncRNA

>peptide 1 (46 aa)
KSECPVRTSPSDFYGSGSTGPLSFHCKEWEVIAVLCEASLTQSPPL*

>peptide 2 (39 aa)
KVNVQLGQAHLTFMDQVAPARYPSTAKNGRLSLCSVKPA*

>peptide 3 (36 aa)
MAFAWTTWPNSLLGMGRPADCQPKSSQLGLNNVQTP*

Sequence

>CNT30597892
AAAAGTGAATGTCCAGTTAGGACAAGCCCATCTGACTTTTATGGATCAGGTAGCACCGGCCCGTTATCCTTCCACTGCAAAGAATGGGAGGTTATCGCTG
TGCTCTGTGAAGCCAGCCTGACGCAGTCTCCCCCACTCTAAGAGCCAAGCAGCCAATGGCTTTCGCTTGGACCACTTGGCCCAATTCCTTGCTTGGAATG
GGCAGGCCAGCAGATTGCCAACCTAAATCCAGTCAGTTGGGCTTGAACAATGTCCAAACACCTTGATGCCCCCACTTGGGTCACAAGCTTGCGTTACCAA
GCTCG