Detailed information on CNT3045920


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070907Prunus dulcisQuercus suber48.6946.5684.56149reverse complement
CNT30379440Prunus dulcisManihot esculenta47.3945.8987.59145reverse complement
CNT30632032Prunus dulcisVigna unguiculata25.491388.4678reverse complement
CNT30708521Prunus dulcisGlycine max33.3333.5585.29102forward
CNT30158859Prunus dulcisPistacia vera46.4149.4886.62142reverse complement
CNT3092489Prunus dulcisSolanum tuberosum28.7629.6387.588forward
CNT30591720Prunus dulcisMusa acuminata25.4924.4589.7478forward
CNT30212879Prunus dulcisHelianthus annuus47.7148.584.25146forward
CNT30155101Prunus dulcisPrunus persica10055.0498.69306forward
CNT3058749Prunus dulcisAmborella trichopoda18.9521.2594.8358forward
CNT30176610Prunus dulcisVigna angularis28.4315.4887.3687forward

Expression of CNT3045920

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PSFVTQAYNPSGGFEVLEHWLSIRGSVPG*

>peptide 2 (57 aa)
MWLERRLWVSWFLERREPRKAGFTEQRLPPALGSGRITGRCPSDPPWAARLSQLNQTF

Sequence

>CNT3045920
GCCGAGCTTTGTAACGCAAGCTTATAACCCGAGTGGGGGCTTTGAGGTTCTGGAACATTGGCTCAGTATTAGAGGGTCGGTTCCGGGTTGACTATCTTCT
GGCTCGCCCATTCCAAGCCAGGAGTTGAACCATGTGGCTCGAGCGAAGGCTCTGGGTCTCTTGGTTCCTAGAGAGGAGGGAACCGCGTAAGGCTGGCTTC
ACAGAGCAACGATTACCTCCCGCTCTTGGCAGTGGAAGGATAACGGGTCGGTGTCCCTCGGATCCACCGTGGGCCGCTAGACTGTCCCAATTGAACCAAA
CCTTTT