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Detailed information on CNT30114516


BLAST search results

BLAST vs Swiss-Prot:
sp|P22953|HS701_ARATH, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697339Eutrema salsugineumOryza sativa24.3216.7587.3271forward
CNT30673030Eutrema salsugineumSetaria viridis56.1659.4281.71164forward
CNT30520958Eutrema salsugineumSetaria italica22.264.6693.8565forward
CNT30441947Eutrema salsugineumAegilops tauschii22.268.5392.3165forward
CNT30451043Eutrema salsugineumSaccharum spontaneum57.8819.8482.25169forward
CNT304903Eutrema salsugineumZea mays22.2613.2993.8565forward
CNT30647172Eutrema salsugineumRosa chinensis57.1943.9582.04167forward
CNT30582481Eutrema salsugineumEchinochloa crusgalli23.2914.5994.1268forward
CNT30112153Eutrema salsugineumFicus carica45.5514.7882.71133forward

Expression of CNT30114516

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MVVFLGIRVVMTPPARSDIEQQKILDLLISFTTENSALDGCTVSNGLIGVDRFAKFLAIEEVLEQLLNLGDTGGTTNKNNI

Sequence

>CNT30114516
GTTGGTTGTCTGAGTAGGTGGAGAAGACCTGCTCCTTCTTGGTTGGGATGGTGGTGTTTCTCGGGATAAGGGTGGTCATGACACCACCGGCGAGGAGTGA
CATCGAGCAACAGAAGATCTTGGACCTTCTCATTTCCTTCACCACTGAGAATAGCGCCCTGGACGGCTGCACCGTAAGCAACGGCCTCATCGGGGTTGAT
AGATTTGCAAAGTTCCTTGCCATTGAAGAAGTCTTGGAGCAATTGCTGAACCTTGGGGATACGGGTGGAACCACCAACAAGAACAACATCGT