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Detailed information on CNT30380192


BLAST search results

BLAST vs Swiss-Prot:
sp|A6YG72|EFTU_PLETE, E-value = 4e-15

BLAST vs NONCODE:
NONMEST004097, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618435Manihot esculentaSesamum indicum13.3762.1288.52305forward
CNT30727591Manihot esculentaCorchorus capsularis20.3417.1992.67464forward
CNT30195181Manihot esculentaPisum sativum20.2597.4790.04462forward
CNT30160107Manihot esculentaPistacia vera19.1197.5493.35436forward
CNT30288144Manihot esculentaTriticum aestivum15.0892.9790.7344forward
CNT30224124Manihot esculentaHordeum vulgare13.0210088.89297forward
CNT3084119Manihot esculentaVigna radiata20.3426.0788.79464forward
CNT30440878Manihot esculentaAegilops tauschii10.7431.1790.2245forward
CNT30598511Manihot esculentaFraxinus excelsior19.7769.2888.03451forward
CNT3067093Manihot esculentaLeersia perrieri11.5358.8491.25263forward
CNT30646927Manihot esculentaRosa chinensis13.8594.0590.19316forward
CNT30721807Manihot esculentaTriticum spelta10.9227.790.36249forward
CNT30570869Manihot esculentaVitis vinifera14.610090.99333forward
CNT30645139Manihot esculentaCannabis sativa10.385.1495.32235forward
CNT3024873Manihot esculentaPopulus trichocarpa16.5767.0289.42378forward
CNT30120974Manihot esculentaCitrus clementina20.3476.5790.95464forward
CNT3037774Manihot esculentaCucumis melo20.7461.1986.05473forward

Expression of CNT30380192

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPRSINDSAVVLGGLKLPQGNINGDTTFTLSLELVKNPGILE*

>peptide 2 (44 aa)
MVIPRSRSALSLSRTQAYLNDLLFISAASFSNLSITRLSIPPSL*

>peptide 3 (51 aa)
MMMTCDVKLAASLAGSSLEFDATNPLFRSFTATFFTLNPTLSPGRASWRAS*

>peptide 4 (69 aa)
SLLGGRLGHFSSTWVLLLNTLDHTNSNSLAHVPNSESTQWRVPRESLHNHGKRNNIATAYLAPNSGCCT*

>peptide 5 (60 aa)
PFLAADLVTLAPLGSFFSTLLITPTATVWRMSLTANLPSGGYPEKVSTTMANVIISPPPI*

>peptide 6 (94 aa)
MLRAPTHKSFPSLLGSRLGDFSSTWVLLLNTLDHTNSNCLAHVPNSESTQWRVPRESLHNHGLGRNHLHEPSITIFQKLGLLLKLFARPTINLG*

>peptide 7 (72 aa)
MSLTANLPSGGYPEKVSTTMGLVGIIFTNPASPFFKNLGSFSSSLPDLRSILVKISANFTAMWEVWQSSTGA*

>peptide 8 (51 aa)
MMMTCDVKLAASLAGSSLEFDATNPLFRSFTATFFTLNPTLSPGRASWRAS*

>peptide 9 (45 aa)
MMHLNRLNFSCQTSRSEGHNHSRVVHDDDLRCKVGSLLGRIILRV*

>peptide 10 (29 aa)
MLTSLTILGNTGFKTTSGGINNKDSTVSL*

>peptide 11 (54 aa)
MMHLNRLNFSCQTSRSEGHNHSRLQDTSFHTTHWDSSNTTNLVNILKWETERLV*

Sequence

>CNT30380192
CTCCCTTCTTGGCGGCAGACTTGGTCACTTTAGCTCCACTTGGGTCCTTCTTCTCAACACTCTTGATCACACCAACAGCAACAGTCTGGCGCATGTCCCT
AACAGCGAATCTACCCAGTGGAGGGTACCCAGAGAAAGTCTCCACAACCATGGCAAACGTAATAATATCGCCACCGCCTATCTAGCACCCAATTCTGGGT
GCTGTACGTAGACGTCGGGCAAAAAAAGTACAAAATAGAAACACTACCAAAACAACTTGAAAAACTAAGATAAATATAAGATGTCCTCAACAGTAATATT
AAATGCTCCGCGCTCCCACGCACAAATCATTTCCCTCCCTTCTTGGCAGCAGACTTGGTGACTTTAGCTCCACTTGGGTCCTTCTTCTCAACACTCTTGA
TCACACCAACAGCAACTGTCTGGCGCATGTCCCTAACAGCGAATCTACCCAGTGGAGGGTACCCAGAGAAAGTCTCCACAACCATGGGCTTGGTCGGAAT
CATCTTCACGAACCCAGCATCACCATTTTTCAAAAACTTGGGCTCCTTCTCAAGCTCTTTGCCAGACCTACGATCAATCTTGGTTAAGATTTCAGCAAAC
TTCACAGCAATGTGGGAGGTGTGGCAATCCAGCACTGGGGCATAACCATTTCCAATCTGACCAGGGTGGTTCATGATGATGACCTGCGATGTAAAGTTGG
CAGCCTCCTTGGCAGGATCATCCTTAGAGTTTGATGCAACAAATCCTCTCTTCAGATCTTTCACTGCAACGTTCTTCACGTTGAACCCAACATTGTCACC
AGGGAGGGCCTCCTGGAGAGCCTCATGATGCATCTCAACAGACTTAACTTCAGTTGTCAGACCAGTAGGTCCGAAGGTCACAACCATTCCAGGGTGGTTC
ATGATGATGACCTGCGATGTAAAGTTGGCAGCCTCCTTGGCAGGATCATCCTTAGAGTTTGATGCAACAAATCCTCTCTTCAGATCTTTCACTGCAACGT
TCTTCACGTTGAACCCAACATTGTCACCAGGGAGGGCCTCCTGGAGAGCCTCATGATGCATCTCAACAGACTTAACTTCAGTTGTCAGACCAGTAGGTCC
GAAGGTCACAACCATTCCAGGCTTCAGGACACCAGTTTCCACACGACCCACTGGGACAGTTCCAATACCACCAATCTTGTAAACATCCTGAAGTGGGAGA
CGGAGAGGCTTGTCTGAGGGCCTCTTGGGCTCCTGGATCTGGTCCAGAGCTTCAAGAAGAGTTGGGCCCTTGTACCAGTCAAGGTTGGTTGATCTCTCAA
TCATATTGTCACCTTCAAACCCAGAGATGGGAACAAAAGGAATCTTATCAGGGTTGTATCCAACCTTCTTGAGGTAGGAGGAGACTTCCTTGACAATTTC
ATCGTACCTAGCCTTGGAGTACTTGGGGGTGGTGGCATCCATCTACACAGATTTAAATAACAAAATAAATAGATAATATGCAACAGGAAATATTCATGAT
CTCAAAGCACCATACATGCATAACTTTACAAGACTAGTATGTCTATTTTCCAAACAATAAGAAACACAATTCACTGCTAACACACATCAGCCCCAAACCA
TTATAACATCTATCCTGGACAGACAACACAAGTATTATCACTTCCAATCACCCAACCTATTCCTCCACTTTACTACCACCTACTAAACACCCTCACAGTA
TAGCATTTTCAATACAATGTTAAGATCTTTCATTTTTACCAAATTATGAAAAAAAAAAGGATAAAAATAAGCAACGTTGTAAAGGCACATCCAAAAGCAA
CAAGTTATTAGTTTGTTACCTTGTTGCAGCAGCAAATCATTTGTTTGACACCAAGGGTAAAAGCAAGAAGGGCATGCTCACGAGTTTGACCATCCTTGGA
AATACCGGCTTCAAAACCACCAGTGGTGGAATCAATAATAAGGACAGCACAGTCAGCCTGTGAGGTACCAGTAATCATATTCTTAATAAAGTCACGATGC
CCAGGAGCATCAATGACAGTGCAGTAGTACTTGGTGGTCTCAAACTTCCACAAGGCAATATCAATGGTGATACCACGTTCACGCTCAGCCTTGAGCTTGT
CAAGAACCCAGGCATACTTGAATGACCTCTTGTTCATCTCAGCAGCTTCCTTCTCAAACCTCTCAATCACACGCTTGTCAATACCTCCAAGCTTGTAGAT
GAGATGGCCAGTGGTGGTGGACTTGCCAGAGTCGACATGGCCAATGACCACAATGTTGATGTGAACCTTCTCCTTACCCAT