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Detailed information on CNT3084119


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000814, E-value = 8e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546688Vigna radiataIpomoea triloba24.1610085.58430forward
CNT30727591Vigna radiataCorchorus capsularis29.6619.5686.17528forward
CNT30380192Vigna radiataManihot esculenta26.0720.3488.79464forward
CNT30525464Vigna radiataPhaseolus vulgaris22.8772.0494.84407forward
CNT30629544Vigna radiataVigna unguiculata42.4710095.11756forward
CNT30195181Vigna radiataPisum sativum25.9697.4787.66462forward
CNT30709121Vigna radiataGlycine max23.65104.9988.6421forward
CNT3093993Vigna radiataSolanum tuberosum26.1289.0886.88465forward
CNT30288144Vigna radiataTriticum aestivum19.1692.1688.27341forward
CNT30224124Vigna radiataHordeum vulgare16.6399.6685.81296forward
CNT30146188Vigna radiataMedicago truncatula19.9445.2285.07355forward
CNT30665783Vigna radiataTriticum dicoccoides27.1353.0285.71483forward
CNT30598511Vigna radiataFraxinus excelsior26.8573.4383.26478forward
CNT30608684Vigna radiataGossypium raimondii22.795.9687.13404forward
CNT3067093Vigna radiataLeersia perrieri14.7858.8488.59263forward
CNT30646927Vigna radiataRosa chinensis17.5893.1588.82313forward
CNT30624959Vigna radiataDaucus carota18.3195.8884.66326forward
CNT30689637Vigna radiataTriticum urartu26.0747.5487.93464forward
CNT30721807Vigna radiataTriticum spelta13.3126.3688.61237forward
CNT30151899Vigna radiataPrunus persica18.3129.5684.05326forward
CNT30570869Vigna radiataVitis vinifera18.7110086.19333forward
CNT30645139Vigna radiataCannabis sativa12.5881.1689.73224forward
CNT3052982Vigna radiataAmborella trichopoda19.125.9985340forward
CNT3024873Vigna radiataPopulus trichocarpa20.2864.0186.43361forward
CNT30120974Vigna radiataCitrus clementina26.0776.5787.5464forward
CNT3037774Vigna radiataCucumis melo42.3697.5483.95754forward
CNT30101083Vigna radiataOryza rufipogon25.0683.5286.77446forward
CNT30580076Vigna radiataEchinochloa crusgalli22.1929.8685.32395forward
CNT30116334Vigna radiataOryza nivara23.4368.3686.33417forward
CNT30176122Vigna radiataVigna angularis28.7645.2398.05512forward
CNT30724009Vigna radiataLupinus angustifolius44.4472.8485.71791forward

Expression of CNT3084119

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MISTAQSAWDVPVIMFLMKSLCPGASITVQ*

>peptide 2 (31 aa)
MASGSRLPRVDMANDHNTDVNLFLTHNCLWKS

>peptide 3 (31 aa)
MTSCSSQQLPSRTSQSHACQFLQACKSDGQW*

>peptide 4 (32 aa)
MTQEYKQETSIYCNHPLMNHPARFTSSSGQPW*

>peptide 5 (54 aa)
MVHLDRLNFSCQSSWCKSHHHSRLDDTSFNTSDRNSSDSSNLVDILKRKPEGLV*

>peptide 6 (81 aa)
MSLTAKRPRGGYSEKVSTTIGLVGTIFTKPASPFFKNLGSFSSSLPERLSILVISSANLTAMWEVKLAASLAGSSLEFEAT*

>peptide 7 (83 aa)
MFTSLPILRNSSFKTTSGGINDQHSTVSLGCPCNHVLNEIPVSGSINNSAVVLGGFKLPQRNINCNPSFTLSLKLVKHPGILE*

Sequence

>CNT3084119
TTAAGATAGAAATAAGTTAGTATTTAAAATGCAAACAAAAATCATCAGACTAAATAAAATTCCAAGCAGGGATATAAAACACGAATATAAAAAGTCTGAT
ATTTAAAATGCAAACAAACAACACAGCAAAGCGGTAAAACTTGCTGCGCTTACAAAAATGTAATCAGGGGTTCTCACAAAATCACAAAAACACATAAAAA
CACATAATAATAATAAAAGAGCCGCCACCGTCGATCAAGAACCCAATTCTGGGAACAAAAGTTGGGAGATGATGGTGGAAACTTCAAACTAAGTACGAAA
AACAATCTACCTAGCGATGACACAAGAGTACAAGCAAGAAACCAGCATTTATTGTAACCATCCCCTGATGAATCACCCAGCACGATTCACTTCTTCTTCT
GGGCAGCCTTGGTGACCTTGGCTCCAGTGGGATCCTTCTTCTCAACGTTCTTGATGACTCCCACAGCAACAGTTTGACGCATGTCCCTCACAGCAAAACG
TCCAAGAGGTGGGTACTCAGAGAAAGTCTCCACAACCATTGGTTTGGTAGGAACCATCTTCACGAAACCAGCATCACCGTTCTTCAAGAACTTAGGCTCC
TTCTCGAGCTCTTTGCCAGAACGCCTGTCAATCTTGGTCATAAGTTCAGCGAACTTGACAGCAATGTGGGAGGTGAAGTTAGCAGCCTCCTTAGCAGGAT
CATCCTTGGAGTTTGAAGCAACATAACCACGCTTGAGATCTTTAACAGCAACATTCTTCACATTGAAACCGACGTTGTCACCAGGGAGAGCTTCTGTGAG
AGCTTCATGGTGCATCTCGACAGACTTAACTTCAGTTGTCAGTCCAGTTGGTGCAAAAGTCACCACCATTCCAGGCTTGATGACACCAGTTTCAACACGT
CCGACAGGAACAGTTCCGATTCCTCCAATCTTGTAGACATCCTGAAGAGGAAGCCTGAGGGGCTTGTCTGATGGCCTCTTGGGCTCAGTGATCTGGTCAA
GTGCCTCGAGCAAGGTAGGTCCCTTGTACCAGTCAAGGTTTGTGGACCTCTCAATCATGTTGTCTCCCTCAAAACCAGAGATTGGAACAAAAGGAATCTT
GTCTGGATTGTATCCCACTTTCTTCAAGTAGGAGGAGACTTCCTTCACAATTTCATCATACCTAGCCTTGGAGTACTTGGGTGTAGTAGCATCCATCTGA
TCCACAGAAAGACAACAACATCAGTTAAAACAAATTAAATTCAAAAGTAATCAATACAAGAGAAATTATTCAAAGGCTTAAAATCTAAAACATAATTAAC
CTTGTTACAGCAACAAATCATCTGCTTCACACCAAGAGTGAATGAAAGAAGAGCATGTTCACGAGTCTGCCCATCCTTAGAAATTCCAGCTTCAAAACCA
CCAGTGGTGGAATCAATGATCAGCACAGCACAGTCAGCTTGGGATGTCCCTGTAATCATGTTCTTAATGAAATCCCTGTGTCCGGGAGCATCAATAACAG
TGCAGTAGTACTTGGTGGTTTCAAACTTCCACAACGCAATATCAATTGTAATCCCTCTTTCACGCTCAGCCTTAAGCTTGTCAAGCACCCAGGCATACTT
GAATGACCTCTTGTTCATCTCAGCAGCTTCCTTCTCGAACCTCTCAATCACACGCTTGTCAATTCCTCCAAGCTTGTAAATCAGATGGCCAGTGGTAGTA
GACTTCCCAGAGTCGACATGGCCAATGACCACAATACTGATGTGAACCTTTTCCTTACCCATAATTGCCTTTGGAAATCT