Detailed information on CNT30721807


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004692, E-value = 1e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Triticum speltaOryza sativa32.1518.3587.89289forward
CNT30521302Triticum speltaSetaria italica32.0419.5588.89288forward
CNT30618428Triticum speltaSesamum indicum18.2433.2786.59164forward
CNT30380192Triticum speltaManihot esculenta27.710.9290.36249forward
CNT30503993Triticum speltaNicotiana attenuata17.0255.6487.58153forward
CNT30160107Triticum speltaPistacia vera26.8153.9190.87241forward
CNT3084119Triticum speltaVigna radiata26.3613.3188.61237forward
CNT30539604Triticum speltaBrassica napus27.3628.7786.59246forward
CNT30233912Triticum speltaBrassica oleracea22.6991.0790.2204forward
CNT30246955Triticum speltaAvena sativa31.716.1593.68285forward
CNT30665783Triticum speltaTriticum dicoccoides39.4938.9795.77355forward
CNT30685754Triticum speltaTriticum urartu39.4921.499.44355forward
CNT30480842Triticum speltaArabidopsis halleri21.840.2588.27196forward
CNT30363108Triticum speltaSorghum bicolor27.9231.3792.83251forward
CNT30423787Triticum speltaPapaver somniferum26.4712.7889.08238forward
CNT30570869Triticum speltaVitis vinifera21.2557.3688.48191forward
CNT30101083Triticum speltaOryza rufipogon27.924795.22251forward
CNT30496615Triticum speltaDigitaria exilis32.0431.7588.54288forward
CNT30116334Triticum speltaOryza nivara27.9241.1595.62251forward

Expression of CNT30721807

SRR9114152: 0.31 RPKM

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MALIGKGDTQANQTEGKLDPINLALNKNMHGR

>peptide 2 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

>peptide 3 (44 aa)
MVIPLSRSAFSLSSTQAYLKDLLFISAASFSNLSITRLSIPPSL*

>peptide 4 (56 aa)
MGLVGIIFTIPASPFFRNLGAASISLPDRLSILVTSSANLTAMWEVPVIMFLMKSR*

Sequence

>CNT30721807
ATTAAGAGCATTCAACACAGGCAGACAAAACCACAAATGGGATAAGAGCACAATAATGGAATCGAAATAGAGTATTTAAACGACACATCATAGCTCGCAC
ACAGATTCTCCAAAAAAGACTTGACACTATAACTTCTGCTAGATAACTCGATGGCAGACACCAGAGCACTCATTTCTTCTTGATGGCAGCCTTGGTAACC
TTGGCGCCGGTGGGGTCCTTCTTCTCAACGCCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCACAGCGAAGCGGCCAAGAGGTGGGTAGG
TGGCGAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACAATACCAGCGTCACCGTTCTTCAGGAACTTGGGCGCAGCCTCAATCTCCTTACC
AGATCGCCTGTCAATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGGGAGGTACCGGTGATCATGTTCTTGATGAAGTCACGGTGACCAGGGGCA
TCAATGACGGTGCAGTAGTACTTGGTGGTCTCAAACTTCCACAGGGCAATATCAATGGTGATACCCCTCTCGCGCTCGGCCTTCAGCTTGTCAAGCACCC
AGGCGTACTTGAAGGACCTCTTGTTCATCTCAGCGGCTTCCTTCTCGAACCTCTCGATCACACGCTTGTCGATACCTCCAAGCTTGTAGATCAGATGGCC
ATCTTCTCCTTACCCATGGCTGAAACTGCAAGACCAGAGTAAACAGGTGTCAGAACAGAAGATGCAGAACAGAAGTTAGGAGCCATCATGCTTAGCAAAT
GAAATGGCCTTAATAGGAAAAGGTGACACTCAAGCCAATCAGACAGAAGGCAAGTTAGATCCAATAAACCTTGCATTGAACAAAAACATGCATGGCAGA