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Detailed information on CNT3037774


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 1e-116

BLAST vs NONCODE:
NONBNAT001751, E-value = 4e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Cucumis meloOryza sativa60.829.8485.74470forward
CNT30677701Cucumis meloSetaria viridis58.9966.5787.06456forward
CNT30521218Cucumis meloSetaria italica60.9338.6187.47471forward
CNT30639730Cucumis meloNymphaea colorata41.2734.7184.64319forward
CNT30535563Cucumis meloEucalyptus grandis60.857.684.89470forward
CNT30316757Cucumis meloCorylus avellana59.938.6590.71463forward
CNT30546799Cucumis meloIpomoea triloba61.4538.6886.74475forward
CNT30518094Cucumis meloJuglans regia58.4748.2987.61452forward
CNT30371709Cucumis meloArabidopsis thaliana50.4560.5685.9390forward
CNT30618435Cucumis meloSesamum indicum45.0270.8887.07348forward
CNT30272277Cucumis meloChenopodium quinoa46.0580.5488.76356forward
CNT3020493Cucumis meloCitrullus lanatus39.3319.6996.05304forward
CNT30727586Cucumis meloCorchorus capsularis61.4536.8288.63475forward
CNT30380192Cucumis meloManihot esculenta61.1920.7486.05473forward
CNT30525464Cucumis meloPhaseolus vulgaris52.5271.8685.96406forward
CNT30629544Cucumis meloVigna unguiculata87.1989.1584.87674forward
CNT30194937Cucumis meloPisum sativum58.9945.6584.21456forward
CNT30505987Cucumis meloNicotiana attenuata29.6269.689.08229forward
CNT30160120Cucumis meloPistacia vera61.4538.2187.79475forward
CNT30637620Cucumis meloCapsicum annuum34.4113.8585.34266forward
CNT30287202Cucumis meloTriticum aestivum53.8257.8686.06416forward
CNT30224987Cucumis meloHordeum vulgare37.1397.2987.11287forward
CNT30387246Cucumis meloTriticum turgidum60.840.8386.38470forward
CNT30564257Cucumis meloActinidia chinensis59.2539.9784.72458forward
CNT3084119Cucumis meloVigna radiata97.5442.3683.95754forward
CNT30541587Cucumis meloBrassica napus58.4738.4486.95452forward
CNT30238010Cucumis meloBrassica oleracea58.4736.9386.5452forward
CNT30173274Cucumis meloTrifolium pratense58.8633.8388.13455forward
CNT30146334Cucumis meloMedicago truncatula34.4126.7687.59266forward
CNT30440878Cucumis meloAegilops tauschii30.1429.6489.27233forward
CNT30246955Cucumis meloAvena sativa60.4126.4685.87467forward
CNT30665783Cucumis meloTriticum dicoccoides60.851.5988.51470forward
CNT30310177Cucumis meloCamelina sativa59.2539.4886.24458forward
CNT3059440Cucumis meloArabidopsis lyrata58.4775.3385.84452forward
CNT3077042Cucumis meloBrassica juncea58.4737.5486.95452forward
CNT30614135Cucumis meloArabis alpina59.6429.5586.77461forward
CNT30598511Cucumis meloFraxinus excelsior52.0161.7585.32402forward
CNT30449495Cucumis meloSaccharum spontaneum60.838.6287.23470forward
CNT30132437Cucumis meloLolium perenne60.5438.9484.83468forward
CNT3011166Cucumis meloZea mays60.833.2487.02470forward
CNT30608730Cucumis meloGossypium raimondii39.3350.6786.84304forward
CNT30232362Cucumis meloAnanas comosus33.8945.8885.88262forward
CNT30647369Cucumis meloRosa chinensis33.6428.788.85260forward
CNT30127375Cucumis meloCorymbia citriodora40.7556.4585.71315forward
CNT30624959Cucumis meloDaucus carota43.4798.8283.63336forward
CNT30685098Cucumis meloTriticum urartu60.831.9788.51470forward
CNT30721805Cucumis meloTriticum spelta24.7113.2389.53191forward
CNT30350898Cucumis meloEragrostis tef60.4141.9286.94467forward
CNT30480841Cucumis meloArabidopsis halleri47.8759.5883.51370forward
CNT30368387Cucumis meloSorghum bicolor58.8652.7287.69455forward
CNT30355521Cucumis meloLactuca sativa57.5746.6587.64445forward
CNT30151899Cucumis meloPrunus persica43.8630.7386.73339forward
CNT30427756Cucumis meloPapaver somniferum60.4135.8187.79467forward
CNT30706337Cucumis meloPrunus avium61.1940.5787.74473forward
CNT30644842Cucumis meloCannabis sativa25.3648.5189.29196forward
CNT3052982Cucumis meloAmborella trichopoda44.2426.1585.96342forward
CNT3024315Cucumis meloPopulus trichocarpa40.6241.1587.9314forward
CNT30147611Cucumis meloBrachypodium distachyon24.1931.1790.37187forward
CNT30101053Cucumis meloOryza rufipogon35.9633.4588.49278forward
CNT30580076Cucumis meloEchinochloa crusgalli43.3425.3289.85335forward
CNT30496962Cucumis meloDigitaria exilis60.841.8186.81470forward
CNT30116111Cucumis meloOryza nivara35.9631.7787.77278forward
CNT30594443Cucumis meloEragrostis curvula60.840.4886.81470forward
CNT30603788Cucumis meloOryza punctata60.839.985.53470forward
CNT30176122Cucumis meloVigna angularis60.841.5285.74470forward
CNT30113122Cucumis meloFicus carica53.9550.2488.49417forward
CNT30724009Cucumis meloLupinus angustifolius93.7966.7685.66725forward
CNT3050294Cucumis meloCucumis sativus58.7374.0685.46454forward

Expression of CNT3037774

Peptides detected in this lncRNA

>peptide 1 (48 aa)
AGFDHLFLLHGGLGDLGSCWVLLLHTLDNTNSNGLTHITNSKTTQWWV*

>peptide 2 (34 aa)
QALITYFFFTADLVTLAPVGSFFSTLLITPTATV*

>peptide 3 (46 aa)
MGLVGTILTIPASPFFKNLGSFSSSLPDRRSILVRISANLTAMWEM*

Sequence

>CNT3037774
GCAGGCTTTGATCACTTATTTCTTCTTCACGGCGGACTTGGTGACCTTGGCTCCTGTTGGGTCCTTCTTCTCCACACTCTTGATAACACCAACAGCAACG
GTTTGACGCATATCACGAACAGCAAAACGACCCAATGGTGGGTATGAAGAGAAGGTCTCCACAACCATGGGCTTGGTTGGAACCATCTTAACCATACCGG
CATCTCCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTACCAGATCGACGATCGATTTTGGTGAGGATCTCAGCGAACTTAACAGCAATGTGGGA
GATGTGAAGTTGGCAGCTTCCTTGGCAGGGTCGTCCTTGGAGTTCGAGGCAACAAAACCACGCTTGAGATCCTTGACAGCAACGTTCTTGACGTTGAATC
CAACATTGTCACCGGGCAAAGCTTCTGGGAGAGACTCGTGGTGCATTTCAACAGACTTAACTTCAGTGGTCAGTCCAGTTGGTCCGAACGTAACAACCAT
ACCAGGCTTGAGGATACCAGTTTCAACACGTCCAACAGGGACAGTTCCAATACCACCAATCTTGTAAACGTCCTGAAGTGGGAGACGGAGGGGCTTGTCT
GAGGGCCTCTTGGGCTCAGAGATCAAGTCAAGAGCCTCAAGAAGGGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCT
CGAAACCAGAGATTGGAACGAAGGGGATTTTGTCTGGGTTGTATCCGACCTTCTTGAGGTAAGATGAGACTTC