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Detailed information on CNT30570869

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004692, E-value = 1e-95

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30672466	Vitis vinifera	Setaria viridis	93.99	87.43	88.82	313	forward
CNT30520930	Vitis vinifera	Setaria italica	49.85	60.81	89.16	166	forward
CNT30546688	Vitis vinifera	Ipomoea triloba	97.3	75.35	90.12	324	forward
CNT30378189	Vitis vinifera	Arabidopsis thaliana	81.98	66.1	87.91	273	forward
CNT30727591	Vitis vinifera	Corchorus capsularis	100	12.33	90.39	333	forward
CNT30380192	Vitis vinifera	Manihot esculenta	100	14.6	90.99	333	forward
CNT30195181	Vitis vinifera	Pisum sativum	100	70.25	89.49	333	forward
CNT30160107	Vitis vinifera	Pistacia vera	99.1	73.83	90.91	330	forward
CNT30637620	Vitis vinifera	Capsicum annuum	82.88	14.37	91.67	276	forward
CNT3093993	Vitis vinifera	Solanum tuberosum	100	63.79	89.19	333	forward
CNT30288144	Vitis vinifera	Triticum aestivum	62.76	56.49	87.08	209	forward
CNT30224124	Vitis vinifera	Hordeum vulgare	88.29	98.99	89.46	294	forward
CNT30386294	Vitis vinifera	Triticum turgidum	62.16	56.25	86.96	207	forward
CNT30562819	Vitis vinifera	Actinidia chinensis	55.56	36.71	90.81	185	forward
CNT30590647	Vitis vinifera	Musa acuminata	42.34	45.19	88.65	141	forward
CNT3084119	Vitis vinifera	Vigna radiata	100	18.71	86.19	333	forward
CNT30233912	Vitis vinifera	Brassica oleracea	46.25	68.75	89.61	154	forward
CNT30509848	Vitis vinifera	Solanum lycopersicum	66.67	96.52	90.54	222	forward
CNT30658093	Vitis vinifera	Triticum dicoccoides	67.87	51.72	86.28	226	forward
CNT30312075	Vitis vinifera	Camelina sativa	56.16	33.27	88.24	187	forward
CNT30614135	Vitis vinifera	Arabis alpina	100	21.35	90.39	333	forward
CNT30608684	Vitis vinifera	Gossypium raimondii	83.78	66.27	88.17	279	forward
CNT3067093	Vitis vinifera	Leersia perrieri	40.24	29.98	88.06	134	forward
CNT30646927	Vitis vinifera	Rosa chinensis	56.16	55.65	89.84	187	forward
CNT30625732	Vitis vinifera	Daucus carota	40.84	63.55	87.5	136	forward
CNT30689637	Vitis vinifera	Triticum urartu	100	34.12	87.39	333	forward
CNT30721807	Vitis vinifera	Triticum spelta	57.36	21.25	88.48	191	forward
CNT30338600	Vitis vinifera	Eragrostis tef	95.8	66.46	88.09	319	forward
CNT30480842	Vitis vinifera	Arabidopsis halleri	44.74	30.6	88.59	149	forward
CNT30368333	Vitis vinifera	Sorghum bicolor	58.56	72.49	88.21	195	forward
CNT30354785	Vitis vinifera	Lactuca sativa	56.46	28.83	81.38	188	forward
CNT30423787	Vitis vinifera	Papaver somniferum	100	17.87	87.09	333	forward
CNT30704438	Vitis vinifera	Prunus avium	39.64	54.77	90.15	132	forward
CNT30644460	Vitis vinifera	Cannabis sativa	61.26	68.23	88.73	204	forward
CNT3031228	Vitis vinifera	Theobroma cacao	35.14	47.18	89.74	117	forward
CNT30323623	Vitis vinifera	Asparagus officinalis	42.04	44.87	86.43	140	forward
CNT30120974	Vitis vinifera	Citrus clementina	100	54.95	89.79	333	forward
CNT30101083	Vitis vinifera	Oryza rufipogon	97.3	60.67	87.04	324	forward
CNT30116334	Vitis vinifera	Oryza nivara	89.49	48.85	86.91	298	forward
CNT30594407	Vitis vinifera	Eragrostis curvula	85.29	100	88.03	284	forward
CNT30726347	Vitis vinifera	Lupinus angustifolius	99.1	69.18	88.18	330	forward

Expression of CNT30570869

Peptides detected in this lncRNA

>peptide 1 (59 aa)
LLQQQIICFTPRVKASSACSRVCPSLEIPASKPPVVESIMRTAQSACEVPVIMFLMKSR*

>peptide 2 (51 aa)
MTRSINNSAVVPGGLKLPQGNINGDTTFTLSLQFVQHPGILEGPLVHFSCLL

>peptide 3 (47 aa)
LVTAANHLLHTKGESKQCMLTGLSILGDTGFKTTSGGINNENSTVCL*

>peptide 4 (28 aa)
MVIPRSRSAFSLSNTQAYLKDRLFISAAS

Sequence

>CNT30570869
CTTGTTACAGCAGCAAATCATCTGCTTCACACCAAGGGTGAAAGCAAGCAGTGCATGCTCACGGGTTTGTCCATCCTTGGAGATACCGGCTTCAAAACCA
CCAGTGGTGGAATCAATAATGAGAACAGCACAGTCTGCCTGTGAGGTACCAGTAATCATGTTCTTGATGAAGTCCCGATGACCAGGAGCATCAATAACAG
TGCAGTAGTACCTGGTGGTCTCAAACTTCCACAAGGCAATATCAATGGTGATACCACGTTCACGCTCAGCCTTCAGTTTGTCCAACACCCAGGCATACTT
GAAGGACCGCTTGTTCATTTCAGCTGCCTCCTT