Detailed information on CNT30617543


BLAST search results

BLAST vs Swiss-Prot:
sp|P26413|HSP70_SOYBN, E-value = 3e-113

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696916Sesamum indicumOryza sativa9.925.9483.3390forward
CNT30673030Sesamum indicumSetaria viridis17.3857.2581.01158forward
CNT30168984Sesamum indicumPistacia vera12.4335.3189.38113forward
CNT3094140Sesamum indicumSolanum tuberosum14.0820.1382.03128forward
CNT304854Sesamum indicumZea mays12.149.7781.82110forward
CNT3067065Sesamum indicumLeersia perrieri13.7529.4181.6125forward
CNT30647172Sesamum indicumRosa chinensis15.436.8483.57140forward
CNT30625375Sesamum indicumDaucus carota20.3579.7481.62185forward
CNT30685597Sesamum indicumTriticum urartu9.94586.6790forward
CNT30369286Sesamum indicumOryza glumipatula13.9721.2781.1127forward

Expression of CNT30617543

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MSSLLNLPLSFVIVILFFTPAVLSSAVTFRIPFASMSKVTLICGTPLGAGGMPRDNGVTSRSNKS*

Sequence

>CNT30617543
CGCCGCCAGGCATGCCATCACCCATCGGCACACCATCACTACCACCTCCGCTTTGATACATTTTTGAAATAATTGGATTACAAATGCCTTCCAATTCCTT
CAGCTTATCCTCTAGCTCATCAACCTCAGCCAGCTGATTCCTATCTAACCACTCAATAGTCTCCTCCACCGCCTTCTCGATCTTCTCCTTGTCGCTCGGA
TCCAACTTTGCTGCGAATTTCTCGTCCCTCACCGTGTTCCTCATGTTATAGGAATAATTCTCCAGACTGTTCTTCGCCTCCACCTTCTTCTTGACGTCCT
CATCCTCGGCTTTGTACCTCTCGGCATCCTTAACCATTTTCTCTATGTCCTCCTTGCTCAATCTTCCTTTATCGTTCGTGATCGTTATCTTGTTCTTCAC
ACCGGCCGTCTTGTCCTCTGCCGTCACATTTAGAATACCGTTTGCATCGATGTCAAAAGTCACGTTGATCTGCGGGACGCCTCTTGGCGCTGGGGGGATG
CCAAGAGACAACGGAGTGACATCAAGGAGCAACAAGTCTTGAACCTTCTCATCGCCTTCCCCTGTCAAGATTGCTGCCTGCACAGCTGCGCCGTAGGCCA
CGGCCTCATCCGGATTAATGCTCTTGCACAGCTCCTTCCCATTGAAGAAGTCTTGCAAGAGCTGCTGAACTTTGGGAATCCTAGTCGATCCACCAACAAG
CACCACCTCATGGACCTGAGATTTGTCAATCTTTGAATCTCTCAAACACTTCTCCACAGGATCCATACACAACTCCTCGAACCTCGCCCTTGTTATTGTG
GCGTAAAAATCGATCCCTTCGAACAAAGAATCGACTTCGATCGTCGTCTGAGTGGTGGAGGAAAGAGTCCTCTTGGCTCTCTCACAAGCAGTTCTCAGCC
TCCTCAAAG