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Detailed information on CNT30361740


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696704Sorghum bicolorOryza sativa30.1628.5791.392reverse complement
CNT30522415Sorghum bicolorSetaria italica96.0787.4686.69293forward
CNT3069056Sorghum bicolorQuercus suber20.986.0590.6264forward
CNT30561829Sorghum bicolorActinidia chinensis22.319.0589.7168forward
CNT30587665Sorghum bicolorMusa acuminata23.9323.5587.6773forward
CNT30542027Sorghum bicolorBrassica napus21.9721.8291.0467forward
CNT30236753Sorghum bicolorBrassica oleracea21.9721.8291.0467forward
CNT3076575Sorghum bicolorBrassica juncea21.9721.3488.0667forward
CNT30262508Sorghum bicolorBrassica rapa20.9820.7890.6264forward
CNT30612154Sorghum bicolorArabis alpina21.6421.7187.8866reverse complement
CNT30445279Sorghum bicolorSaccharum spontaneum97.751.0389.26298reverse complement
CNT30130300Sorghum bicolorLolium perenne37.3839.4587.72114reverse complement
CNT3015356Sorghum bicolorZea mays97.0566.8287.16296reverse complement
CNT30232760Sorghum bicolorAnanas comosus21.9714.6988.0667forward
CNT30714946Sorghum bicolorMalus domestica golden26.8914.1189.0282reverse complement
CNT30339265Sorghum bicolorEragrostis tef93.1188.7586.27284reverse complement
CNT30596339Sorghum bicolorOryza meridionalis25.919.7592.4179reverse complement
CNT3029804Sorghum bicolorTheobroma cacao22.9522.888.5770forward
CNT30103689Sorghum bicolorOryza rufipogon30.1623.5990.2292forward
CNT30117631Sorghum bicolorOryza nivara30.1628.4891.392forward

Expression of CNT30361740

Peptides detected in this lncRNA

>peptide 1 (56 aa)
AEQVATACHPSGGNKVVWMPIVALGPGLGVALCVARPFQVGSGLWALWRKPWCLST*

Sequence

>CNT30361740
GCTGAGCAAGTAGCGACTGCTTGTCACCCGAGCGGGGGCAACAAGGTGGTGTGGATGCCAATTGTGGCGCTTGGACCTGGGCTTGGTGTTGCATTGTGTG
TGGCCCGCCCGTTCCAAGTTGGTAGTGGGTTGTGGGCACTTTGGCGAAAGCCTTGGTGTCTCAGCACCTAGAGCGGTGGGCATTGCGTGAGGCTGGTTTA
ACAGAGCAGCGAATACCACCCGCTTTCAACGGTGGAAGGATAACGAGCCGCTGCACTCCAGACCCACTTAGGCCCATGTGCCCTCTCTGGCAGACCACCA
TTTTT