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Detailed information on CNT30130300


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696704Lolium perenneOryza sativa34.631.0691100forward
CNT30522415Lolium perenneSetaria italica67.4758.2185.13195reverse complement
CNT30308216Lolium perenneTriticum aestivum22.8421.7196.9766reverse complement
CNT30391813Lolium perenneTriticum turgidum22.8421.0295.4566forward
CNT30541131Lolium perenneBrassica napus22.8421.4389.3966reverse complement
CNT30236855Lolium perenneBrassica oleracea22.8421.3689.3966reverse complement
CNT30554032Lolium perenneOryza glaberrima23.1813.9994.0367reverse complement
CNT30442760Lolium perenneAegilops tauschii22.8421.7196.9766reverse complement
CNT30662530Lolium perenneTriticum dicoccoides24.5720.8892.9671reverse complement
CNT3076575Lolium perenneBrassica juncea22.8421.0289.3966reverse complement
CNT30263689Lolium perenneBrassica rapa22.8421.589.3966reverse complement
CNT30445279Lolium perenneSaccharum spontaneum51.925.6886150forward
CNT3015504Lolium perenneZea mays25.6112.2391.8974reverse complement
CNT3067608Lolium perenneLeersia perrieri24.5723.0594.3771reverse complement
CNT30684136Lolium perenneTriticum urartu22.8419.1395.4566reverse complement
CNT30339268Lolium perenneEragrostis tef96.8995.5684.29280reverse complement
CNT30361740Lolium perenneSorghum bicolor39.4537.3887.72114reverse complement
CNT30572433Lolium perenneVitis vinifera20.7610.899060forward
CNT30105324Lolium perenneOryza longistaminata23.182192.5467forward
CNT30150266Lolium perenneBrachypodium distachyon24.5723.2894.3771reverse complement
CNT30103689Lolium perenneOryza rufipogon34.625.6490100reverse complement
CNT30576754Lolium perenneOryza barthii23.1817.8294.0367forward
CNT30117631Lolium perenneOryza nivara34.630.9691100reverse complement
CNT3050857Lolium perenneCucumis sativus22.4921.2490.7765reverse complement

Expression of CNT30130300

Peptides detected in this lncRNA

>peptide 1 (32 aa)
VVCQRGHLDLIGPELQRPVILPPLEAGGNAAL*

Sequence

>CNT30130300
GTGGTCTGCCAGAGAGGGCACCTGGACCTAATTGGGCCTGAGTTGCAGCGGCCAGTTATCCTTCCACCGTTGGAAGCGGGCGGTAACGCTGCTCTGTGAA
ACCAGCCTCACGCCATTTCCGCCACTCCAAGTGCAAGGACGCCCAGGCTTTCGCCGGAGCGCCACGAGCCCACTACGCAACTTGGAACGGGCTGTCCACG
AAGTGCAACCCAGGCCCAGGCACAAGCGCCACACTAGGCATCCAAACGCCACCCAAATGCCCCCGCTCGGGTTACAAGTCCATGCTAAT