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Detailed information on CNT30587665


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Musa acuminataQuercus lobata22.5822.892.8670forward
CNT30381752Musa acuminataManihot esculenta21.6121.989.5567forward
CNT30526259Musa acuminataPhaseolus vulgaris24.5224.9288.1676forward
CNT3044357Musa acuminataPrunus dulcis25.4825.9989.8779forward
CNT30566738Musa acuminataActinidia chinensis22.5819.594.2970forward
CNT30212743Musa acuminataHelianthus annuus26.7726.9586.7583forward
CNT30625980Musa acuminataDaucus carota26.7727.2187.9583forward
CNT30361740Musa acuminataSorghum bicolor23.5523.9387.6773forward
CNT30409088Musa acuminataPapaver somniferum25.4824.1689.8779reverse complement
CNT3026903Musa acuminataPopulus trichocarpa21.6122.0492.5467forward
CNT30319113Musa acuminataAsparagus officinalis24.529.4493.4276reverse complement
CNT30120361Musa acuminataCitrus clementina27.127.7289.2984reverse complement

Expression of CNT30587665

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MRSGRRLGSHWILKRRAQRQAGFTEQRIPPALDGGRITSRRTPHPYTHLANTDQTITFF

>peptide 2 (75 aa)
MNVRAKRVGCGRVNLGLPVPILQLNHAVWAKAGVALDLKAEGTASGWLHRAANTSRSRRWKDNKSAHASPIYPLG*

Sequence

>CNT30587665
TCGCCGAGCCTGGTAGCGATGGCTTGTTACCCAAGCGGGGGCATTGAGGTGGTGGAATGAATGTGAGAGCCAAGCGGGTGGGGTGTGGACGTGTAAATCT
CGGCTTGCCCGTTCCAATCTTGCAGCTGAACCATGCGGTCTGGGCGAAGGCTGGGGTCGCATTGGATCTTAAAGCGGAGGGCACAGCGTCAGGCTGGCTT
CACAGAGCAGCGAATACCTCCCGCTCTCGACGGTGGAAGGATAACAAGTCGGCGCACGCCTCACCCATATACCCACTTGGCTAATACTGATCAAACCATC
ACTTTTTTTG