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Detailed information on CNT30300292


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 1e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513114Triticum aestivumJuglans regia36.9632.8783.1695forward
CNT30270368Triticum aestivumChenopodium quinoa34.6317.0284.2789forward
CNT30526306Triticum aestivumPhaseolus vulgaris42.0211.5382.41108forward
CNT30487770Triticum aestivumOlea europaea34.6319.7383.1589forward
CNT30709355Triticum aestivumGlycine max35.0212.9392.2290forward
CNT30564637Triticum aestivumActinidia chinensis67.3215.1987.28173forward
CNT30138628Triticum aestivumLolium perenne71.9839.2895.68185forward
CNT30205828Triticum aestivumHelianthus annuus27.6318.4488.7371forward
CNT30626732Triticum aestivumDaucus carota41.638.5585.98107forward
CNT30347972Triticum aestivumEragrostis tef59.1418.7292.76152forward
CNT30596737Triticum aestivumOryza meridionalis71.630.2694.57184forward
CNT30358059Triticum aestivumLactuca sativa34.638.3783.1589forward
CNT30573808Triticum aestivumVitis vinifera38.5215.5786.8799forward

Expression of CNT30300292

Peptides detected in this lncRNA

>peptide 1 (84 aa)
LLLLVLEGGGEVEGVEDAAGVAALVGREAVALEDGVLVDGARVLDVLPPPDLDVVEEDELDDEQRGGGGEVGPPGPPPAPAGRNH

Sequence

>CNT30300292
GCTCCTTCTCCTTGTTCTCGAGGGTGGGGGCGAAGTTGAGGGGGTTGAAGACGCTGCCGGGGTAGCCGCACTCGTGGGGCGGGAGGCTGTAGCTCTTGAA
GATGGGGTCCTGGTTGACGGAGCCCGGGTTCTTGATGTCCTGCCACCGCCGGATCTCGACGTAGTGGAAGAGGATGAACTCGATGACGAACAGCGTGGAG
GAGGAGGCGAAGTAGGTCCTCCGGGTCCTCCGCCAGCGCCAGCGGGTCGAAACCATT