Detailed information on CNT30208094


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30270368Helianthus annuusChenopodium quinoa63.8729.0684.87152forward
CNT30171733Helianthus annuusTrifolium pratense77.7326.4381.62185forward
CNT30144644Helianthus annuusMedicago truncatula57.5636.1584.67137forward
CNT30358059Helianthus annuusLactuca sativa81.5118.2588.14194forward
CNT30414433Helianthus annuusPapaver somniferum46.228.8786.36110forward
CNT30723301Helianthus annuusLupinus angustifolius21.0111.719650forward

Expression of CNT30208094

Peptides detected in this lncRNA

>peptide 1 (31 aa)
RGQTVVFKNRILVNTSRVLDILPSSDLDVME*

>peptide 2 (45 aa)
MNSITNKVDDDAKYSDFPASYHLGTLIMPMLVKTSGSSASPKGSNP

Sequence

>CNT30208094
TTCGGGGGCAAACTGTAGTTTTTAAAAATCGGATCTTGGTTAACACTTCCCGGGTTCTTGATATCTTGCCATCTTCTGATCTCGACGTAATGGAATAGAA
TGAATTCGATCACAAACAAGGTTGATGATGATGCGAAGTATTCGGACTTTCCAGCATCATACCACTTAGGGACATTGATTATGCCTATGCTTGTGAAAAC
CTCAGGGTCTTCTGCTAGTCCCAAAGGGTCGAACCCAT