Detailed information on CNT30103189


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 8e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30270368Oryza rufipogonChenopodium quinoa35.7815.8785.5483forward
CNT30526306Oryza rufipogonPhaseolus vulgaris25.866.488.3360forward
CNT30709355Oryza rufipogonGlycine max35.3411.7890.2482forward
CNT30564637Oryza rufipogonActinidia chinensis36.217.3788.184forward
CNT3084615Oryza rufipogonVigna radiata25.865.288.3360forward
CNT30658632Oryza rufipogonTriticum dicoccoides28.028.4289.2365forward
CNT30626732Oryza rufipogonDaucus carota39.667.3588.0492forward
CNT30358059Oryza rufipogonLactuca sativa42.249.2284.6998forward
CNT30573808Oryza rufipogonVitis vinifera25.439.2891.5359forward

Expression of CNT30103189

Peptides detected in this lncRNA

>peptide 1 (76 aa)
DAARVLDVLPPPDLHVVEQDELDDEQRRRRREVASRPPPASPTARSPAPPARTTAGSPGPPPDPTGRTRYRLASCTH

Sequence

>CNT30103189
GACGCAGCCAGGGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACGAACAGCGTCGACGACGACGCGAAGTAG
CATCCCGGCCACCCCCAGCATCGCCCACCGCCCGTTCACCAGCTCCGCCTGCACGAACCACCGCAGGTTCTCCGGGTCCTCCGCCAGACCCAACGGGTCG
AACCCGTTATCGCCTGGCAAGCTGTACACACC