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Detailed information on CNT30138628


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695632Lolium perenneOryza sativa36.7318.5893.64173forward
CNT30675792Lolium perenneSetaria viridis37.7925.5497.19178forward
CNT30523309Lolium perenneSetaria italica37.7915.297.19178forward
CNT30513114Lolium perenneJuglans regia19.5331.8383.792forward
CNT30381598Lolium perenneManihot esculenta23.9920.3282.3113forward
CNT30526306Lolium perennePhaseolus vulgaris22.9311.5383.33108forward
CNT30487770Lolium perenneOlea europaea22.0823.0682.69104forward
CNT30708850Lolium perenneGlycine max34.1820.3385.09161forward
CNT30300292Lolium perenneTriticum aestivum39.2871.9895.68185forward
CNT30224179Lolium perenneHordeum vulgare18.2620.3810086forward
CNT30395365Lolium perenneTriticum turgidum18.2631.598.8486forward
CNT30564637Lolium perenneActinidia chinensis28.4511.7687.31134forward
CNT3084615Lolium perenneVigna radiata33.5513.6979.75158forward
CNT30554639Lolium perenneOryza glaberrima36.7365.2893.64173forward
CNT30626732Lolium perenneDaucus carota22.088.3186.54104forward
CNT30684486Lolium perenneTriticum urartu18.2640.1993.0286forward
CNT30347972Lolium perenneEragrostis tef27.8116.1395.42131forward
CNT30596737Lolium perenneOryza meridionalis34.6126.8193.25163forward
CNT30358059Lolium perenneLactuca sativa20.819.2282.6598forward
CNT30370946Lolium perenneOryza glumipatula36.7313.9993.64173forward
CNT30573808Lolium perenneVitis vinifera22.9316.9887.04108forward
CNT30102887Lolium perenneOryza rufipogon36.7320.6493.64173forward
CNT30577292Lolium perenneOryza barthii36.7315.5993.64173forward
CNT30117373Lolium perenneOryza nivara36.7311.0593.64173forward
CNT30604528Lolium perenneOryza punctata36.7315.1592.49173forward

Expression of CNT30138628

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MNSMTKSVEEEATLRRQRRRGLANAAGVSEQGRVNRGRRAQGHDGGAGGDRRHVSLS*

>peptide 2 (84 aa)
RGREVERVEDAAWVSALVGRQAVALEDGVLVDAPRVLDVLPPPDLDVVEEDELDDEERGGGGYASSTKTTRPGQRGWSVRTRQS*

Sequence

>CNT30138628
GCGTGGGCGCGAAGTTGAGCGGGTTGAAGACGCTGCCTGGGTATCCGCACTCGTGGGGCGGCAGGCTGTAGCTCTTGAAGATGGGGTCCTGGTTGACGCA
CCCCGGGTTCTTGATGTCCTGCCACCGCCGGATCTCGACGTAGTGGAAGAGGATGAACTCGATGACGAAGAGCGTGGAGGAGGAGGCTACGCTTCGTCGA
CAAAGACGACGAGGCCTGGCCAACGCGGCTGGAGTGTCCGAACAAGGCAGAGTTAACCGAGGTCGACGGGCGCAAGGCCACGACGGGGGCGCGGGCGGTG
ATCGACGCCATGTTTCCCTGAGCTGAGAGCGCACAGATCGTTCTGCTGGCAGGTGCAGCTTGGACTGTATTAAACTGCCAGGGAGTGGCCACGAGGCTCT
GCTTGGATGTACGGTCAGGATCGGCGTTGCGCCTGGATCGGAGGGCCGGGCTGCGTCGTGAGATGGGTGGC