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Detailed information on CNT30513114


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 4e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695632Juglans regiaOryza sativa34.9510.8585.15101forward
CNT30675545Juglans regiaSetaria viridis32.8720.6185.2695forward
CNT30523687Juglans regiaSetaria italica32.8713.4485.2695forward
CNT30375998Juglans regiaArabidopsis thaliana20.4217.5186.4459forward
CNT30270368Juglans regiaChenopodium quinoa25.6114.1591.8974forward
CNT30728535Juglans regiaCorchorus capsularis75.7863.4885.84219forward
CNT30381598Juglans regiaManihot esculenta73.3638.1387.26212forward
CNT30526306Juglans regiaPhaseolus vulgaris43.9413.5586.61127forward
CNT30487770Juglans regiaOlea europaea38.7524.8388.39112forward
CNT30708773Juglans regiaGlycine max73.0133.684.83211forward
CNT30300292Juglans regiaTriticum aestivum32.8736.9683.1695forward
CNT30564637Juglans regiaActinidia chinensis34.958.8787.13101forward
CNT3084615Juglans regiaVigna radiata43.9411.0185.83127forward
CNT30554639Juglans regiaOryza glaberrima34.9538.1185.15101forward
CNT30171733Juglans regiaTrifolium pratense78.8932.5781.58228forward
CNT30144863Juglans regiaMedicago truncatula69.920.3482.67202forward
CNT30138628Juglans regiaLolium perenne31.8319.5383.792forward
CNT30605371Juglans regiaGossypium raimondii22.1525.285.9464forward
CNT30205828Juglans regiaHelianthus annuus69.251.9583200forward
CNT30626732Juglans regiaDaucus carota39.799.1989.57115forward
CNT30596737Juglans regiaOryza meridionalis34.9516.6184.16101forward
CNT30358059Juglans regiaLactuca sativa35.649.6988.35103forward
CNT30370946Juglans regiaOryza glumipatula34.958.1685.15101forward
CNT30573808Juglans regiaVitis vinifera73.0133.1884.36211forward
CNT30102823Juglans regiaOryza rufipogon34.9511.2285.15101forward
CNT30577292Juglans regiaOryza barthii34.959.185.15101forward
CNT30117373Juglans regiaOryza nivara34.956.4585.15101forward
CNT30604528Juglans regiaOryza punctata34.958.8484.16101forward
CNT30723301Juglans regiaLupinus angustifolius23.5315.9388.2468forward

Expression of CNT30513114

Peptides detected in this lncRNA

>peptide 1 (59 aa)
NLPFAISFSLASRVGAKLSGLKIPPGYPSSWGGRLYCLKMGSWLTLPGFFMSCHLLIST*

>peptide 2 (32 aa)
MNSITNRVDEDAKFSGSSASPRGSNPLSPGRLE

>peptide 3 (72 aa)
QFTICNLLLLGLKSRCKVKWVENSARVSQLMGGQTVLLKDGVLVDTSWVLYVLPPSDLNVMEQNELDHEQGR*

Sequence

>CNT30513114
CAATTTACCATTTGCAATCTCCTTCTCCTTGGCCTCAAGAGTAGGTGCAAAGTTAAGTGGGTTGAAAATTCCGCCAGGGTATCCCAGCTCATGGGGGGGC
AGACTGTATTGCTTAAAGATGGGGTCCTGGTTGACACTTCCTGGGTTCTTTATGTCTTGCCACCTTCTGATCTCAACGTAATGGAACAAAATGAACTCGA
TCACGAACAGGGTCGATGAGGATGCAAAGTTTTCAGGATCCTCAGCAAGTCCAAGAGGATCAAACCCATTGTCACCAGGAAGACTGGAA