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Detailed information on CNT30312432


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536082Camelina sativaEucalyptus grandis91.7760.381.51357forward
CNT30316118Camelina sativaCorylus avellana89.9749.0281.43350forward
CNT30500730Camelina sativaCoffea canephora98.4644.3381.98383forward
CNT30628927Camelina sativaVigna unguiculata77.6353.9382.78302forward
CNT30708216Camelina sativaGlycine max87.666182.4341forward
CNT3042412Camelina sativaPrunus dulcis96.9250.8884.35377forward
CNT3087851Camelina sativaVigna radiata88.4337.6482.27344forward
CNT30256659Camelina sativaAvena sativa60.6733.0180.51236forward
CNT30668234Camelina sativaTriticum dicoccoides41.3927.3883.23161forward
CNT30680596Camelina sativaTriticum urartu57.845080.89225forward
CNT30476914Camelina sativaArabidopsis halleri10069.4692.03389forward
CNT30366570Camelina sativaSorghum bicolor76.0948.3780.74296forward
CNT30154791Camelina sativaPrunus persica96.9248.5284.35377forward
CNT30573979Camelina sativaVitis vinifera90.7560.5583.85353forward
CNT3028162Camelina sativaTheobroma cacao96.1466.6782.62374forward
CNT3051546Camelina sativaAmborella trichopoda61.955082.16241forward
CNT3023412Camelina sativaPopulus trichocarpa92.0363.3682.68358forward
CNT30551544Camelina sativaOryza brachyantha56.8131.881.9221forward
CNT3049385Camelina sativaCucumis sativus90.7544.5781.87353forward

Expression of CNT30312432

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQVKSGYKQVMLGCKQAKSGCSLVMLGCS*

>peptide 2 (29 aa)
MLDCSLETLDCSLETWGCSSERWENRKDL*

Sequence

>CNT30312432
CTGTAACTTGGTGAAGTTGGGCTGTAGCCAGGAGAAGTGGGGCTGTATGCAGGTGAAGTAGGACTGTAAGATGGTGATGTGGGACTATAGGATGGTGAGG
TAGGGCTGTAAGAAGGAGAGGTTGGACTGTATGCAGGTGAAGTCGGGCTATAAGCAGGTGATGTTGGGCTGTAAGCAGGCGAAGTCGGGCTGTAGCTTGG
TGATGTTGGGCTGTAGCTAGGAGATGTTGGACTGTAGCTTGGAGACGTTGGACTGTAGCTTGGAGACGTGGGGCTGTAGCTCGGAGAGGTGGGAGAATAG
GAAGGACTTGTAGGAGAATAAGCAGGGCTTGTTGGACTATAGCCAGGAGAACTGGGACTGTAGGTAGGCGAAGTGGGACTATAACCGGG