Detailed information on CNT30680596


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 2e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30312432Triticum urartuCamelina sativa5057.8480.89225forward
CNT30705862Triticum urartuPrunus avium67.7828.7280.66305forward
CNT30584443Triticum urartuEchinochloa crusgalli64.4441.8584.14290forward

Expression of CNT30680596

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MWGCSSEMWESMMDWLESMMDCSGCRKESQ

>peptide 2 (36 aa)
CSLEKSDCTGSSSLGCLENRYLKDCTWPKKGCSSVK*

>peptide 3 (75 aa)
MSGCTRAMSVCMRATSGYKLVMKGCMKEMWGCMMAMLGYKMVKSGCMQEMSGSMPEMLDCSLAKWDSMPERLDCS*

Sequence

>CNT30680596
CTGTAGTTTGGAGAAGTCTGACTGTACGGGCTCATCATCCTTGGGCTGCTTGGAGAATAGATATTTGAAGGACTGTACTTGGCCGAAGAAGGGCTGTAGC
TCGGTGAAGTAGGGCTGTAGCTCGGTGATGTCGGGCTGTACGAGGGCGATGTCGGTCTGTATGAGGGCGACGTCGGGCTATAAGTTGGTGATGAAGGGCT
GTATGAAGGAGATGTGGGGCTGTATGATGGCGATGTTGGGCTATAAGATGGTGAAGTCGGGCTGTATGCAGGAGATGTCGGGCAGTATGCCGGAGATGTT
GGACTGTAGCTTGGCGAAGTGGGACAGTATGCCGGAGAGGTTGGACTGTAGCTAGGAGATGTGGGGCTGTAGCTCGGAGATGTGGGAGAGTATGATGGAC
TGGTTGGAGAGTATGATGGACTGCTCGGGCTGTAGGAAGGAGAGCCAGGA