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Detailed information on CNT30316118


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 5e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Corylus avellanaNymphaea colorata58.9655.6178.62421forward
CNT30536082Corylus avellanaEucalyptus grandis39.3647.4783.99281forward
CNT30549101Corylus avellanaIpomoea triloba49.1659.4979.77351forward
CNT30516792Corylus avellanaJuglans regia80.1164.2787.41572forward
CNT30376379Corylus avellanaArabidopsis thaliana76.3373.2581.1545forward
CNT30616460Corylus avellanaSesamum indicum80.394082.4574forward
CNT30267763Corylus avellanaChenopodium quinoa55.3256.6782.28395forward
CNT3021339Corylus avellanaCitrullus lanatus59.3866.8882.78424forward
CNT30524942Corylus avellanaPhaseolus vulgaris62.3266.3280.67445forward
CNT30628927Corylus avellanaVigna unguiculata65.8383.9380.85470forward
CNT30489068Corylus avellanaOlea europaea57.5683.280.78411forward
CNT30708216Corylus avellanaGlycine max76.1997.3281.99544forward
CNT3091337Corylus avellanaSolanum tuberosum79.2769.3678.98566forward
CNT3087851Corylus avellanaVigna radiata72.5556.6782.24518forward
CNT30235097Corylus avellanaBrassica oleracea86.6977.2879.48619forward
CNT30508722Corylus avellanaSolanum lycopersicum49.4468.8181.3353forward
CNT30312432Corylus avellanaCamelina sativa49.0289.9781.43350forward
CNT3076593Corylus avellanaBrassica juncea65.8386.0881.28470forward
CNT30263540Corylus avellanaBrassica rapa41.8846.3683.61299forward
CNT3017147Corylus avellanaZea mays36.4136.3682.69260forward
CNT30605857Corylus avellanaGossypium raimondii80.3970.7879.97574forward
CNT30648676Corylus avellanaRosa chinensis74.2371.1480.57530forward
CNT30476941Corylus avellanaArabidopsis halleri64.9957.9382.11464forward
CNT30366537Corylus avellanaSorghum bicolor35.9929.4781.71257forward
CNT30154712Corylus avellanaPrunus persica87.1179.8584.41622forward
CNT30705862Corylus avellanaPrunus avium102.6669.0279.4733forward
CNT30642025Corylus avellanaCannabis sativa47.3465.8984.32338forward
CNT3028162Corylus avellanaTheobroma cacao68.9187.782.11492forward
CNT3051702Corylus avellanaAmborella trichopoda59.9469.9379.21428forward
CNT30121049Corylus avellanaCitrus clementina82.6354.5380.85590forward
CNT3035160Corylus avellanaCucumis melo54.4877.1881.75389forward
CNT30497905Corylus avellanaDigitaria exilis34.7327.4682.26248forward

Expression of CNT30316118

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MLDYNWVRLDYTPEMWGYKLVRLGCMKEKWDCKKVMWGCKMGKWGCMPVMWGCMLAKWGCMLGKWGCNLER*

>peptide 2 (40 aa)
MSGTLGYTLERWGCTQGRWGYTQGMTDYSPEMRGCSPVMM*

Sequence

>CNT30316118
GAGATGTAGGACTATATGGACTTGACGGTGACAATCTTGGACTACTTGGTGAGTATGCCAGTGAAGGGCTGTACTTCGCCGACTGAGGATTATAGCTAGG
AGATGTTGGACTATAACTGGGTGAGGTTGGACTATACCCCGGAGATGTGGGGCTATAAGCTGGTGAGGTTGGGCTGTATGAAGGAGAAGTGGGACTGTAA
GAAGGTGATGTGGGGCTGTAAGATGGGGAAGTGGGGCTGTATGCCGGTGATGTGGGGCTGTATGCTGGCGAAGTGGGGCTGTATGCTGGGGAAGTGGGGC
TGTAACTTGGAGAGGTAGGGCTGTAAGTTGGAGATGTTGGGCTGTAGCTGGGAGAGGTTGGGCTGTAGCTGGGAGAGGTAGGGCTGTAGCTGGGAGAGGT
AGGCGAGTAAGATGGACTTGTAGGAGAATAGGCAGGACTGGTTGGGCTATAGCCCGGAGAACTAGGGCTATATGTCGGGGACGTTGGGCTATACCCTGGA
GAGGTGGGGCTGTACCCAGGGGAGGTGGGGCTATACCCAGGGGATGACGGACTATAGCCCGGAGATGAGGGGCTGTAGCCCGGTGATGATGTAGGAGAAA
AAGCCATTCCACCAACATAAGGAGAAAACTGAGCATCCGTAATGGGTGACAGACGGAGATTTGGGCTCAGCAAATAATTTGGAGACATCAAGCCCTCATG
ATATGGAGTTCCTG