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Detailed information on CNT30196749


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT001211, E-value = 6e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516889Pisum sativumJuglans regia50.3733.5587.19203forward
CNT30378644Pisum sativumArabidopsis thaliana58.8183.7583.97237forward
CNT30617295Pisum sativumSesamum indicum22.0821.7184.2789forward
CNT30728061Pisum sativumCorchorus capsularis61.7926.1684.34249forward
CNT30168132Pisum sativumPistacia vera51.1250.1283.98206forward
CNT30586804Pisum sativumMusa acuminata48.6425.3980.61196forward
CNT30441907Pisum sativumAegilops tauschii53.684.7180.09216forward
CNT30313575Pisum sativumCamelina sativa46.1579.8385.48186forward
CNT3062349Pisum sativumArabidopsis lyrata52.6124.3484.43212forward
CNT3078381Pisum sativumBrassica juncea58.3188.0183.83235forward
CNT30614348Pisum sativumArabis alpina42.4316.2187.13171forward
CNT30623465Pisum sativumDaucus carota56.5881.4381.58228forward
CNT30721041Pisum sativumTriticum spelta27.5453.8882.88111forward
CNT30364046Pisum sativumSorghum bicolor53.3536.9483.26215forward
CNT30621035Pisum sativumCajanus cajan51.8630.5685.17209forward
CNT30569889Pisum sativumVitis vinifera54.0945.880.28218forward
CNT3054454Pisum sativumAmborella trichopoda26.0518.7581.9105forward
CNT30321935Pisum sativumAsparagus officinalis52.8510.0483.1213forward
CNT30602701Pisum sativumGaldieria sulphuraria38.7114.6582.69156forward

Expression of CNT30196749

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MHKESLTCEASKQSTMPSLHLLSSNKQRKRNLDRMKR*

Sequence

>CNT30196749
AGTTGACTCCTTTGACCAAAACAAATGCACAAAGAATCATTAACATGTGAAGCCTCTAAGCAATCTACAATGCCATCATTACATCTCCTATCTAGTAACA
AGCAACGTAAAAGAAATTTAGATCGCATGAAAAGATAACAATACTCACAGCTAGGAGTGGTCAATTTGAGAGTCCTGAAGCAGATATCATAAAGAGCTTC
GTTATCAAGAACCATACATTCATCAGCGTTCTCCACCAACTGATGAACTGAGAGAGTAGCATTGTAAGGCTCAACAACAGTATCAGAAACCTTAGGCGAA
GGAAACACCGAGAACGTGAGCATCATCCTATCAGGATACTCCTCTCTAATCTTGGATATCAACAGTGTTCCCATTCCAGATCCCGTTCCTCCACCTAACG
AAT