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Detailed information on CNT30321935


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196749Asparagus officinalisPisum sativum10.0452.8583.1213forward
CNT30168132Asparagus officinalisPistacia vera11.2658.1584.52239forward
CNT3085348Asparagus officinalisVigna radiata3.5330.2489.3375reverse complement
CNT30313575Asparagus officinalisCamelina sativa9.6687.9880.98205forward
CNT3062349Asparagus officinalisArabidopsis lyrata11.3627.6780.5241forward
CNT3078381Asparagus officinalisBrassica juncea11.9795.1382.68254forward
CNT3041885Asparagus officinalisChlamydomonas reinhardtii4.5723.7782.4797forward
CNT30623465Asparagus officinalisDaucus carota11.2685.3681.17239forward
CNT30621035Asparagus officinalisCajanus cajan8.5826.6181.87182forward
CNT3054454Asparagus officinalisAmborella trichopoda7.5428.5784.38160forward

Expression of CNT30321935

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MILINKIISFNSNMGLIHTLCYEKYLPSRKRKKRSLFLRVCLDFNGVKGS*

>peptide 2 (75 aa)
MLIICSSTSLVLILPRNIAEAVRYRPWRGSAAHIMFLASHICWVSSGTVRDRYCWDPREVRGAKPTMKNGVEGRG*

>peptide 3 (98 aa)
LHKVGRVLVLDVDHLLIDLFGAHLATKHSGGGEVSAMAGVGGAHHVLSVPHLLGELGDSERSVLLGPTGGEGCKADHEEWSRGKGMRLTASLRRSELS*

>peptide 4 (29 aa)
MRSGYSSLIFDINNVPMPEPVPPPKEWQTW

>peptide 5 (36 aa)
MESREGDEIDGKLAEVRVELTRESEAACNSAHGSRN*

>peptide 6 (38 aa)
MFPNKVKYTTIQSSKQRKLFAVCSLQFAISLINNIELT*

Sequence

>CNT30321935
CTCCACAAAGTAGGACGAGTTCTTGTTTTGGATGTTGATCATCTGCTCATCGACCTCTTTGGTGCTCATCTTGCCACGAAACATAGCGGAGGCGGTGAGG
TATCGGCCATGGCGGGGGTCGGCGGCGCACATCATGTTCTTAGCGTCCCACATTTGTTGGGTGAGCTCGGGGACAGTGAGAGATCGGTACTGCTGGGACC
CACGGGAGGTGAGGGGTGCAAAGCCGACCATGAAGAATGGAGTCGAGGGAAGGGGATGAGATTGACGGCAAGCTTGCGGAGGTCAGAGTTGAGCTGACCA
GGGAATCGGAGGCAGCATGTAACTCCGCTCATGGTAGCCGAAATTAAGTGATTGAGATCGCCAACTGAATTCAGTAAAACATCAAGTTAGAAATCAAACC
AGTTTCAGAACGAAAGAAAAGGCATCATTATCGCCAAGGTTAATGATTCTATTAAGATAGCTAGACAATTGAAGGGACATGTGTGTGCAATAGATAAACC
ATCTTAAACAAACTAACTAATTTTGGAGGATGAGGCATAGTTGAGCTCAGTAACAGTAGATCTCAAAAATCAAAGTATAAAAAAATTGTGTAGCATACAT
CTCCTTTCTTTCACTATAACCATAATCATCATTACTCAAACATTTATCACAGTAGAAGGAGCAAGCATTGGATTGCAAGGTTCCAATTCTAATGGAGTTT
AAGCTCAGCTATCGATCTAACATTAACCCTAACATAATCTGAATCAAGTTCCTCATCAAGAATATTCAGGCAAAAGAGACCTGTCATAACCCTAAAACCT
AGTCTTTCCCTTCCTACTCAAGAAGATATATTAAAGAATCAAAAGCATCTCCTACTTTGAATAACTGCACATCTCTTAACATATAATGCAAATGTCCAAA
CAATGTTGAAAATAATGACAACACATGAAACGTTAGCCTCTCGATAACGTAAAATGCAAAGCAATGTAATGCATAACATAGGTTACATATTATCACAATT
ATCAAATATATAGATTACATATTATCACAATTATCAAATATATCATGATTTTAATAAATAAAATCATCAGTTTCAATTCAAACATGGGTTTGATTCACAC
TCTATGTTATGAGAAATATTTACCATCCAGAAAGAGGAAAAAACGAAGTCTTTTTCTAAGGGTGTGTTTGGATTTCAATGGCGTTAAGGGAAGTTAAGGG
AAACTAAGTGAGAGAAGGGAAGGGAAGGGAAGGGAGTTCCCTTCCCCTTGGTTACACCCTAATTTGGGGGGGTAACAAATTTTATACTATTAAAGGGTGA
ACCAAGGGAAACTAGGGTGAATAACTTCACCTCCTAAATGTTCCCAAACAAGGTGAAATACACAACTATTCAAAGTTCTAAACAAAGAAAATTATTTGCA
GTTTGCAGTTTGCAGTTTGCAATCTCCTTGATAAATAACATTGAATTAACATAGTTATATTGAAAATAATGCATGTTATATTGAAATAAAGTAAATTTTA
TTGAAACAGTGCACAATTTATTGTTATAACTTAGATTTATGACGCGTCTGAGTTATTTCAAGGGGTTATGTAACATTTACGGTTTGTTACTTAACGCAAA
ATAATGAGTTAGGCAACGGGTTTTTTCAATAATGGGTGTAAATAAGTGCATGCAACAAAACAAAAGGCCAACTAACAACCACCAAAGTGATTAGTCCTTA
ACATGTATAGCACTTGAAGCAATCAATAGAGACTACCTTCAACTAAATCTCTCCATATATAGAAAACAAACACAAAGGAAATTAGCCTAATAGTAACAAT
ATAAAAACTCCCTTTGAAAAGGAATGGAACATTATTAGGTGGGAGAAGTACTTACAGCTCGGGGTTGTCAGCTTTAGAGTGCGGAAGCAGATATCATAGA
GGGCCTCATTATCGAGTACCATGCACTCATCTGCATTTTCCACAAGCTGGTGCACTGAAAGAGTAGCATTATAGGGCTCAACAACTGTATCAGAGACTTT
TGGAGATGGGAAGACGGAGAAGGTGAGCATCATGCGATCGGGATACTCCTCTCTGATCTTTGATATCAACAATGTTCCCATGCCAGAGCCCGTTCCACCT
CCCAAAGAGTGGCAGACTTGGA