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Detailed information on CNT30140910


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 5e-18

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Lolium perenneSetaria italica98.0461.9583.71350forward
CNT30700558Lolium perenneQuercus lobata36.6948.5283.97131forward
CNT30376158Lolium perenneArabidopsis thaliana84.0333.5681300forward
CNT30378927Lolium perenneManihot esculenta76.1943.9480.51272forward
CNT30524942Lolium perennePhaseolus vulgaris61.0632.4981.19218forward
CNT30506119Lolium perenneNicotiana attenuata42.5838.182.89152forward
CNT3088022Lolium perenneVigna radiata62.7551.8580.8224forward
CNT30508722Lolium perenneSolanum lycopersicum85.4359.4579.34305forward
CNT30713436Lolium perenneMalus domestica golden60.7867.3980.65217forward
CNT30688491Lolium perenneTriticum urartu99.4482.9487.89355forward
CNT30154878Lolium perennePrunus persica83.7558.6379.93299forward
CNT30705859Lolium perennePrunus avium73.6735.2179.85263forward
CNT30109704Lolium perenneOryza longistaminata66.1142.4587.71236forward
CNT3035160Lolium perenneCucumis melo84.8760.1278.88303forward
CNT30330867Lolium perenneDioscorea rotundata85.4342.1980305forward
CNT30103220Lolium perenneOryza rufipogon97.7637.5786.25349forward
CNT30498009Lolium perenneDigitaria exilis99.4436.2683.94355forward
CNT30335475Lolium perenneCynara cardunculus93.8425.7980.9335forward

Expression of CNT30140910

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GCLESKHVKDCTWPKKDCSSVKLDCNSAKLGYSWETSGCSRAM*

>peptide 2 (30 aa)
MMATLGYKLAMWGCSSAMWGCSLAMWGCSSA

Sequence

>CNT30140910
GGCTGCTTGGAGAGTAAGCATGTGAAGGACTGTACTTGGCCGAAGAAGGATTGTAGCTCGGTGAAGTTGGACTGTAATTCGGCGAAGTTGGGCTATAGCT
GGGAGACGTCGGGCTGTAGCCGGGCGATGTAGGGCTGTATGCAGGCGATGTTGGGCTGTATGAGGGCGATGTAGGGCTGTATGATGGAGATGTAGGGCTG
TATGAAGGAGACGTGGGGCTGTATGATGGTGACGTGGGGCTGTATGAAGGAGATGTAGGACTGTATGATGGCGACGTTGGGCTATAAACTGGCGATGTGG
GGCTGTAGCTCGGCGATGTGGGGCTGTAGCTTGGCGATGTGGGGCTGTAGCTCGGCG