Detailed information on CNT30688491


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 4e-22

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675703Triticum urartuSetaria viridis66.36101.0782.75284forward
CNT30523536Triticum urartuSetaria italica10075.7583.41428forward
CNT30500730Triticum urartuCoffea canephora78.9739.1279.88338forward
CNT30524942Triticum urartuPhaseolus vulgaris66.3642.3280.99284forward
CNT30628702Triticum urartuVigna unguiculata66.3641.4680.99284forward
CNT3042435Triticum urartuPrunus dulcis64.2539.7481.45275forward
CNT30193210Triticum urartuSecale cereale5010096.73214forward
CNT30591858Triticum urartuMusa acuminata68.6957.9979.25294forward
CNT3088002Triticum urartuVigna radiata62.8550.7580.3269forward
CNT30235097Triticum urartuBrassica oleracea68.4636.5882.25293forward
CNT30140910Triticum urartuLolium perenne82.9499.4487.89355forward
CNT30341750Triticum urartuEragrostis tef95.0975.0986.98407forward
CNT30366570Triticum urartuSorghum bicolor85.2859.6484.11365forward
CNT30154777Triticum urartuPrunus persica64.2534.3881.45275forward
CNT30410012Triticum urartuPapaver somniferum79.4489.4778.82340forward
CNT3027877Triticum urartuTheobroma cacao43.9347.5982.98188forward
CNT30176441Triticum urartuVigna angularis65.6546.4580.07281forward

Expression of CNT30688491

Peptides detected in this lncRNA

>peptide 1 (43 aa)
CSSEKSDCTGSSSLGCLENKHVKDCTWPKKDCSSVKWGCSSVK*

>peptide 2 (71 aa)
MTGMSGCMRATWGCMRVMSGCMRAMLGCTREKWGCMMATSDYKPVMLDYSSEMWGYSLVMLGCSSEMWGCS*

Sequence

>CNT30688491
CTGTAGTTCGGAGAAGTCTGACTGTACGGGCTCATCATCCTTGGGCTGCTTGGAGAATAAGCATGTGAAGGACTGTACTTGGCCGAAGAAGGATTGTAGC
TCGGTGAAGTGGGGCTGTAGTTCGGTGAAGTAGGGCTGTAGCTCGGTGACGTCGGGCTGTAACCAGGCGATGTAGGGCTGTATGCAGGCGATGTAGGGCT
GTATGACGGGGATGTCGGGCTGTATGAGGGCGACGTGGGGCTGTATGAGGGTGATGTCGGGCTGTATGAGGGCGATGTTGGGCTGTACGAGGGAGAAGTG
GGGCTGTATGATGGCGACGTCGGACTATAAACCGGTGATGTTGGACTATAGCTCGGAGATGTGGGGCTATAGCTTGGTGATGTTGGGCTGTAGCTCGGAG
ATGTGGGGCTGTAGCTAGGAGATGTGGG